Kinase activity signatures for predicting response of non-small cell lung cancer patients to PD-1 or PD-L1 immune checkpoint inhibitors
A non-small cell lung cancer, PD-L1 technology, applied in the direction of microbial determination/testing, measuring devices, instruments, etc., can solve the problems of patients' discomfort
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[0367] Example 1. NSCLC patients with short-term progression and advanced (or no) progression on treatment with nivolumab or pembrolizumab can be differentiated based on kinase activity profiles (peptide microarrays).
[0368] PBMCs were isolated from 56 NSCLC patients (including two subgroups) shortly before treatment with an immune checkpoint inhibitor (ICI). All patients received anti-PD1 monotherapy with nivolumab or pembrolizumab and had not received any prior line of immunotherapy. PBMCs were lysed in MPER buffer in the presence of protease and phosphatase inhibitors, and 2 μg total protein was profiled for protein tyrosine kinase (PTK) activity using a dynamic peptide microarray (PamChip). The microarray contained 144 different peptides that are substrates for protein tyrosine kinases. The resulting phosphorylation profiles or kinase activity profiles were processed in R, including a normalization step (variance stabilization normalization, VSN) and correction for syst...
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