The invention relates to a method for preparing a compound foot bath lotion by propolis pollen. The method comprises the following steps: (1) weighing refined propolis, breaking into small blocks, and preparing a propolis ethanol solution by using a specific amount of alcohol; (2) uniformly mixing bee pollen with the alcohol and distilled water, soaking, standing still, extracting supernatant solutions twice, combining the supernatant solutions in a beaker, heating and concentrating in a water bath kettle, and controlling the water temperature to prepare a pollen solution; (3) grinding fructus cnidii, fructus kochiae and fructus xanthii, mixing according to a weight ratio, adding raw water, boiling and filtering;, adding hot water, boiling and filtering; and mixing filtrates to prepare a traditional Chinese medicine solution; (4) carrying out constant-temperature magnetic stirring on polyethylene glycol-400, a propolis solution and Tween-80 in a container, wherein the temperature, the rotation speed and the time are controlled during stirring; clarifying a mixed solution to form a oil phase; adding the bee pollen solution and the traditional Chinese medicine solution, magnetically stirring, cooling the mixed solution, and sub-packaging to prepare the compound foot bath lotion. The compound foot bath lotion has the effects of killing bacteria, relieving itching, clearing heat and toxic materials and the like, and is used for protecting health and treating foot fungal infection diseases.