Gene detection kit for medication guidance of antihypertensive drug lacidipine
A technology for lacidipine and hypertension, applied in the field of oligonucleotide products, can solve the problems of unsuitable multi-SNP detection, limitation of detection objects, rising cost, etc., to achieve high-quality medical services, simple and convenient result analysis, and low cost Effect
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Embodiment 1
[0085] Example 1: Primer design and synthesis
[0086] The target SNP peripheral sequence of this kit is searched in db_SNP (build 132) and Hapmap (Rel 28, PhaseⅡ+Ⅲ, Aug 10) database, and use these sequences to design multiple PCR primers and single base extension primers.
[0087] Design corresponding specific PCR primer core sequences (SEQ1a to SEQ6a) and specific extension primer core sequences (SEQ1b to SEQ6b) for 6 polymorphic sites related to the identification of drug types, including rs2238032, rs2239050, rs2239128, rs10898815, rs2429427, and rs588076 . 6 pairs of PCR primers and 6 extension primers (SEQ1a / b to SEQ6a / b) constitute 2 independent reaction systems. In these two independent reaction systems, SEQ1a to SEQ3a participate in an independent multiplex PCR reaction, SEQ1b to SEQ3b participate in a subsequent independent single-base extension reaction; SEQ4a to SEQ6a participate in another independent multiplex PCR reaction, SEQ4b To SEQ6b participates in a subsequen...
Embodiment 2
[0089] Example 2: Sample DNA extraction
[0090] A total of 10 samples of ordinary Chinese DNA were collected, and they were labeled A1-A10. Among them, sample collection, DNA extraction, etc., were collected from human venous blood according to the instructions and collected with EDTA anticoagulation tube. According to the instructions, the collected blood should be stored at 2-8°C for no more than one week, and stored at -20°C for no more than one month. It can be transported in a curling pot with ice or a foam box with ice. It is recommended to use fresh blood as much as possible. Genomic DNA extraction. Since this kit does not provide human genomic DNA extraction reagents, a commercial nucleic acid extraction kit (such as QIAGEN’s DNeasy Blood and Tissuekit) is used to extract human genomic DNA from 200μl of whole blood of each patient, and NanoDrop 2000( Thermo Company) quantified and standardized to 30ng / μl (A1-A10 respectively). Among them, the kit recommends the detect...
Embodiment 3
[0091] Example 3: Biological experiment
[0092] Use the ABI9700 PCR machine to test the 6 polymorphic loci that can distinguish the drug type according to the instructions.
[0093] The components used in the kit for PCR, PCR product purification and single base extension are:
[0094] Serial number Component name Main ingredients specification 1 PCR primer mix PCR primers 24μL / tube x1 tube 2 PCR reaction solution Taq enzyme, dNTP 72μL / tube x1 tube 3 Enzyme digestion reaction solution SAP enzyme 48μL / tube x1 tube 4 Extension primer mix Extension primer 24μL / tube x1 tube 5 Extension reaction solution Single base elongase, ddNTP 24μL / tube x1 tube 6 Positive quality control Human genomic DNA (30ng / μL) 10μL / tube x1 tube
[0095] The concentration of each primer pair is 500nmol / L.
[0096] According to the instructions, the specific operation method is as follows:
[0097] 1. PCR amplification
[0098] 1.1 In the PCR preparation area, prepare a 200μl PCR reaction tube according to the nu...
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