A Dual Fluorescent PCR Method for the Simultaneous Detection of Horse- and Donkey-Derived Components
A dual fluorescence, donkey-derived technology, applied in biochemical equipment and methods, recombinant DNA technology, microbial measurement/inspection, etc., can solve problems that have not been reported, and achieve good sensitivity, high accuracy, and good specificity Effect
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Embodiment 1
[0027] The design of embodiment 1 primer
[0028] After a large number of comparisons of COX 1 genes in GenBank, the highly conserved and species-specific gene sequence of COX 1 was selected as a template, and a pair of horse COX 1 / donkey COX 1-specific primers and Taqman MGB probes were designed, which were named horse COX1- F(P1), Horse COX 1-R(P2), Donkey COX 1-F(P3), Donkey COX 1-R(P4), Horse COX 1-FAM-MGB-Probe(Probe-P5), Donkey COX 1 -VIC-MGB-Probe (Probe-P6), the primers and probe sequences for dual Taqman MGB real-time fluorescent PCR amplification are as follows:
[0029] P1: 5`-AACCCCCCCTATTCGTTTGATCT-3`
[0030] P2: 5`-ACGGTCTGTGAGAAGCATGGT-3`
[0031] P3: 5`-AGCCTCCTAATCCGTGCTGAA-3`
[0032] P4: 5`-ATGCATGGGCAGTTACAATAACA-3`
[0033] P5: 5`-FAM-AGCCCCCCGGTCC-MGB-3`
[0034] P6: 5`-VIC-ACCCTGCTGGGAGAT-MGB-3`
Embodiment 2
[0035] The establishment of embodiment 2 fluorescence quantitative PCR detection method
[0036] 1. Extract sample DNA
[0037] (1) Take 0.2g of horse meat or donkey meat samples and cut them into pieces as much as possible. Place in a 1.5ml centrifuge tube, add 1ml of cell lysis buffer, 20μl proteinase K (500μg / ml), and mix well. Water-bath in a constant temperature water bath at 65°C for 30 minutes, and shake the centrifuge tube several times intermittently. Centrifuge at 12,000 rpm for 5 minutes in a tabletop centrifuge, and transfer the supernatant to another centrifuge tube.
[0038] (2) Add an equal volume of phenol:chloroform mixture (1:1), shake and mix, and centrifuge at 12,000rpm for 10min.
[0039] (3) Take the supernatant to another tube, add an equal volume of chloroform, shake and mix, and centrifuge at 12,000 rpm for 10 min.
[0040] (4) Take the supernatant to another tube, add 1 / 10 volume of 3mol / L sodium acetate and 2 times the volume of absolute ethanol,...
Embodiment 3
[0055] Embodiment 3 specificity test
[0056] In order to verify the specificity of this kit, horse and donkey genomic DNA were used as positive controls, and pigs, cattle, sheep, goats, chickens, ducks, pigeons, quails, turkeys, ostriches, gray geese, cats, mice, domestic Dog, rabbit, roe deer, fox, mink, camel, deer, salmon, rainbow trout, perch, crucian carp, grass carp. A total of 25 species were detected, with dd H 2 O is a blank control, and the fluorescent quantitative PCR detection system established in Example 2 is used to detect the above-mentioned 26 species. After the amplification was completed, the same threshold was taken to analyze the data after deducting the background fluorescence signal, and the Ct value of each sample was determined. See the experimental results figure 1 , figure 2 .
[0057] After the amplification was completed, the same threshold was taken to analyze the data after deducting the background fluorescence signal, and the Ct value of ...
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