Epinephelus malabaricus Piscidin transformation body antimicrobial peptide and application thereof

A Malabar grouper and antimicrobial peptide technology, applied in the biological field, can solve the problems of large-scale production, application difficulties, change of cell permeability, destruction, etc., achieve good application prospects, reduce hemolytic activity and cytotoxicity

Inactive Publication Date: 2016-05-11
SHENZHEN UNIV
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

According to the contradictory relationship between the hydrophilicity and hydrophobicity of piscidin itself, antibacterial activity and hemolytic activity, it is necessary to deduce that the hydrophobicity of the polypeptide sequence should be appropriately reduced to enhance its hydrophilicity, and at the same time maintain its high-performance bactericidal activity. How should it be solved? How to reduce the change, there is no mature plan, no fixed principle, which undoubtedly increases the difficulty of transformation
[0010] Although it has been reported that K is a positively charged amino acid, which makes the peptide have a net positive charge, it can electrostatically attract the negatively charged lipopolysaccharide on the surface of the bacteria, so that the antimicrobial peptide is adsorbed on the surface of the bacteria; L is a hydrophobic Sexual residues make the peptide very hydrophobic, it can penetrate into the lipid bilayer to destroy the structure of the cell membrane, change the permeability of the cell, and then play a bactericidal effect (TeixeiraV, et al, 2012) However, should K replace In what position, is it better to replace as many as possible? There are also many uncertain factors.
[0011] In addition, although many people try to use D-type amino acids to improve the activity of polypeptides, there are still some problems: first, the cost of synthesis is too high; Subsequent experiments and future large-scale production and application will cause certain difficulties

Method used

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  • Epinephelus malabaricus Piscidin transformation body antimicrobial peptide and application thereof
  • Epinephelus malabaricus Piscidin transformation body antimicrobial peptide and application thereof
  • Epinephelus malabaricus Piscidin transformation body antimicrobial peptide and application thereof

Examples

Experimental program
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Effect test

Embodiment 1

[0066] [Example 1]: Prediction and analysis of polypeptide sequence structure

[0067]Select the Kyte&Doolittle model on the website http: / / web.expasy.org / cgi-bin / protscale / protscale.pl to analyze the hydrophobicity of the polypeptide, and predict it on the website http: / / www.expasy.org / tools / pi_tool.html The isoelectric point of the mature peptide predicted by its isoelectric point pI / Mw value was analyzed by bioedit software on the helcalwheeldiagram, and the software chemoffice2008 was used to predict the secondary structure of the above four peptides. Based on the amino acid sequence of emPis-wt, the polypeptide was transformed by replacing and adding amino acid residues, etc., without destroying the α-helical structure, appropriately weakening the hydrophobicity of the polypeptide and increasing the isoelectric point, and finally determined three modified peptides for use In subsequent studies, they were named pisL9K20, pisL9K22TG and pisL9K22WK, respectively.

[0068] D...

Embodiment 2

[0069] [Example 2]: peptide synthesis

[0070] The designed antimicrobial peptides were synthesized by solid-phase chemical synthesis, purified by reverse-phase high-performance liquid chromatography (purity>95%), and identified by electrospray mass spectrometry. This procedure was performed by Shanghai Sangon Biotech Co., Ltd. (Shanghai).

Embodiment 3

[0071] [Example 3]: antibacterial experiment

[0072] 3.1LB medium configuration

[0073] LB medium formula: 10 g of bacto-tyrptone for bacterial culture, 5 g of bacto-yeastextract for bacterial culture, and 10 g of NaCl. After dissolving in deionized water, add 5 mol / L NaOH (about 0.2 mL) dropwise to adjust the pH value to 7.0, add deionized water to adjust the medium volume to 1 L, and sterilize at high temperature and high pressure for later use. Add 1.5% (m / v) agar powder to the solid medium.

[0074] 3.2 Bacterial culture: Take 20 μL of preserved strains of Escherichia coli (Escherichiacoli) TOP10 and Staphylococcus aureus (Staphylococcus aureus) and inoculate them into 20 mL of liquid medium respectively, and culture them overnight at 37°C. Take 200 μL of overnight culture and transfer it to 20 mL of sterile medium, culture at 37°C and 200 rpm for 1-2 hours, so that the OD600 is about 0.2, at this time, the bacterial cell concentration reaches 5×107 cfu / mL, which is th...

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PUM

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Abstract

The present invention provides an epinephelus malabaricus Piscidin transformation body antimicrobial peptide, an encoding gene thereof and a recombinant expression vector containing the encoding gene. The epinephelus malabaricus Piscidin transformation body antimicrobial peptide maintains bactericidal activity close to that of natural antibacterial peptide piscidin, meanwhile significantly reduces rabbit red blood cell hemolytic activity and cytotoxicity on human embryonic kidney cells, and has good application prospects.

Description

technical field [0001] The invention belongs to the field of biotechnology, and in particular relates to an antibacterial peptide and its application. Background technique [0002] The abuse and large doses of current chemicals and antibiotics can easily increase the number of drug-resistant strains. The imbalance of flora and cross-infection in hospitals have become a major problem in hospitals and seriously endanger human health. Environmental deterioration and the greenhouse effect have also accelerated the evolution of drug-resistant and vaccine-resistant pathogen strains (Peneau et al., 2007), and the discovery of antimicrobial peptides provides a new direction for solving these problems. Antimicrobial peptides are a class of small molecular polypeptides with broad-spectrum antimicrobial activity, widely exist in the biological world, and are important non-specific immune factors in the innate immune system. Antimicrobial peptides have the characteristics of small mole...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C07K14/46C12N15/12C12N15/63C12N15/81C12N15/70A61K38/17A61P31/00A23K1/16
CPCA61K38/17C07K14/46C12N15/63C12N15/70C12N15/81
Inventor 邓利原为明胡章立
Owner SHENZHEN UNIV
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