Edge-based local adaptive thresholding system and methods for foreground detection

Active Publication Date: 2017-04-06
VENTANA MEDICAL SYST INC
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  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Benefits of technology

The invention is a method for analyzing images by using a refined edge image and a salinity edge image to create histograms of pixel data. This helps to improve the accuracy of identifying different pixels in the image. The method also uses tensor voting fields to calculate the vote of neighboring pixels, which can help to detect different types of features in the image. This approach can be useful for real-time analysis of digital images derived from tissue slides. The main technical effect of this method is to improve the accuracy and efficiency of image analysis.

Problems solved by technology

Prior techniques primarily utilize edge detection filters and / or intensity statistics based thresholding; and that was not completely effective because of varying tissue density and staining.

Method used

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  • Edge-based local adaptive thresholding system and methods for foreground detection
  • Edge-based local adaptive thresholding system and methods for foreground detection
  • Edge-based local adaptive thresholding system and methods for foreground detection

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Embodiment Construction

[0129]Systems, methods, and computer programs described herein perform edge-based segmentation operations to, for example, identify nuclei. A method of foreground detection for nucleus segmentation, in accordance with the present invention, involves gradient-based edge detection; tensor voting; tensor field pre-computation; local histogram generations; and a threshold determination module to generate an image that results in improved nuclei detection, as shown in FIG. 7. FIG. 6 illustrates a flowchart for foreground detection in accordance with the present invention, and the steps shown in FIG. 6 are described in detail below.

[0130]Gradient Based Edge Detection

[0131]Generally, in an exemplary embodiment of a system in accordance with the present invention, an original / initial image 702 or set of image data is input into the system. After the system receives the original image or image data (as shown in FIG. 7A), a gradient-based edge detection module is utilized to detect edges of s...

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Abstract

Systems and methods for generating a locally adaptive threshold image for foreground detection performing operations including creating a saliency edge strength image or layer indicating edge or border pixels of the nuclei by performing tensor voting on pixels neighboring the initial edge pixels within an image region to refine true edges are featured. Further, for each of a plurality of regions or blocks of the image, an adaptive threshold image is determined by sampling a foreground pixel and a background pixel for each initial edge pixel or refined edge pixel, generating histograms for both background and foreground saliency (or gradient magnitude) modulated histograms, determining a threshold range for each block of the image, and interpolating the threshold at each pixel based on the threshold range at each block. Comparing the input image with the resulting locally adaptive threshold image enables extraction of significantly improved foreground.

Description

CROSS-REFERENCE TO RELATED APPLICATIONS[0001]This patent application is a continuation of International Patent Application No. PCT / EP2015 / 064845 filed Jun. 30, 2015, which claims priority to and the benefit of U.S. Provisional Application No. 62 / 018,848, filed Jun. 30, 2014. Each of the above patent applications is incorporated herein by reference as if set forth in its entirety.FIELD OF THE SUBJECT DISCLOSURE[0002]The present subject disclosure relates to digital pathology. More particularly, the present subject disclosure relates to thresholding methods for nucleus segmentation in digital pathology.BACKGROUND OF THE SUBJECT DISCLOSURE[0003]Nucleus segmentation is a key component for many digital pathology applications. A great deal of effort has been made to extract the mask of nuclei or cells from an image comprising of these structures, which is essential for the efficient characterization of these structures. A popular nucleus segmentation framework starts with foreground detec...

Claims

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Application Information

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IPC IPC(8): G06T7/12G06T7/13G06T7/00G06T7/194G06T7/136
CPCG06T7/12G06T7/194G06T7/136G06T7/0012G06T2207/30024G06T2207/10024G06T2207/10056G06T2207/20021G06T2207/20076G06T7/13G06T2207/20036G06T2207/20164
InventorCHEFD'HOTEL, CHRISTOPHECHUKKA, SRINIVASWANG, XIUZHONG
OwnerVENTANA MEDICAL SYST INC