Rapid identification of strawberry powdery mildew gene by using comparative genomics
A powdery mildew resistant gene and strawberry technology, applied in genetic engineering, plant gene improvement, application, etc., can solve the problems of difficult cloning and long time, and achieve the effect of shortening the excavation cycle, shortening time, and improving identification efficiency
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[0030] The identification of disease-resistant genes plays an important role in the theoretical research of crop disease-resistant genetics and the selection of disease-resistant varieties. This method can quickly identify the strawberry powdery mildew gene. The specific implementation process is as follows:
[0031] 1) Collection of strawberry MLO-type genes
[0032] In order to obtain all the MLO-type gene family members of strawberry, we first constructed an HMM model using the MLO-type genes of Arabidopsis thaliana, and the MLO gene sequences of tomato, pea, rose, pepper, and lotus root against powdery mildew, and collected them from the strawberry genome sequence. Search for MLO-type genes; secondly, use the published MLO gene sequences in different crops as target sequences (from DFCI database: TC171015, TC267529, DFCI: TC327983, TC289653, TC312087, TC132500, TC133436, TC317623, TC317025, TC315947, TC325903, TC31594 TC315912,TC322759,TC322059,TC330654,TC282713,TC293173...
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