Unlock instant, AI-driven research and patent intelligence for your innovation.

Method for amplifying nucleic acid and application thereof

A technology for amplifying nucleic acid and nucleic acid, which is applied in the field of nucleic acid amplification and can solve the problem of low sensitivity and so on.

Active Publication Date: 2020-07-28
北京东方亚美基因科技研究院有限公司
View PDF7 Cites 0 Cited by
  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

The long-Range PCR method used by Lori Frederick can detect EGFRvⅢ mutations at the level of genomic DNA. The specific scheme is as follows: two sets of upstream primers are designed, and the distance between these two sets of adjacent primers is about 5kp, and each set of primers is respectively Mix together, as upstream mixed primers, and perform PCR reactions with downstream primers respectively, but this method is not sensitive and there are many non-specific amplification phenomena

Method used

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
View more

Image

Smart Image Click on the blue labels to locate them in the text.
Viewing Examples
Smart Image
  • Method for amplifying nucleic acid and application thereof
  • Method for amplifying nucleic acid and application thereof
  • Method for amplifying nucleic acid and application thereof

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0081] Embodiment 1, using the time temperature increasing cycle extension reaction method of the present invention to amplify nucleic acid

[0082] 1. Preparation of EGFRvⅢ positive samples

[0083] Human glioblastoma tissue was taken, and its total RNA was extracted, and RT-PCR method (Molecular determinants of the response of glioblastomas to EGFR kinase inhibitors.N Engl J Med 2005; 353:2012-24. Mellinghoff IK, Wang MY, Vivanco I , et al.) to identify the EGFRvⅢ gene; take the human glioblastoma tissue, extract its genomic DNA, and use the method of Lori Frederick (Analysis of genomic rearrangements associated with EGRFvIII expression suggests involvement of Alu repeat elements.Lori Frederick, et al.Neuro Oncol.2000Jul; 2(3):159-63) was verified, and the target molecular bands could be amplified, and the genomic DNA of the glioblastoma tissue was verified to contain the EGFRvⅢ gene by first-generation sequencing (for the sequencing results, see figure 2 ). figure 2 Bef...

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

PUM

No PUM Login to View More

Abstract

The invention discloses a method for amplifying nucleic acid and application thereof. The method for amplifying nucleic acid comprises the step of performing primer extension on an extension reaction template by using an extension primer, thereby acquiring an extension product, namely, the amplified nucleic acid. The primer extension is composed of n circular extension reactions; n is a natural number from 5 to 25; each circular extension reaction in n circular extension reactions is composed of two steps; the first step of each circular extension reaction in n circular extension reactions is performed under the conditions of the reaction temperature at 94 DEG C and the reaction time is 30 seconds; the reaction temperature and the reaction time in the second step of n circular extension reactions are both increasing; the increasing rate of the reaction temperature in the second step is at 0.5 DEG C / circle; the increasing rate of the reaction time in the second step is at 20-30 seconds / circle. According to the method for amplifying nucleic acid provided by the invention, the amplification efficiency of the nucleic acid extension reaction template can be improved.

Description

technical field [0001] The invention relates to a nucleic acid amplification method and its application in the field of biotechnology. Background technique [0002] EGFR is the epidermal growth factor receptor, and EGFR mutations occur in 57% of glioblastoma patients. Moreover, there are many types of EGFR mutations, involving various mutation modes such as gene amplification, gene rearrangement, insertion-deletion, and point mutation. Epidermal growth factor receptor variant type III (EGFRvIII) mutations are common in glioblastoma, and about 50% of EGFR amplification mutant gliomas are accompanied by EGFRvIII mutations. At present, the main detection methods for EGFRvⅢ mutations are 1) real-time quantitative PCR detection at the RNA level; 2) next-generation sequencing to detect somatic mutations. Fluorescent quantitative PCR detection at the RNA level cannot identify mutations at the genomic DNA level, and RNA is easier to degrade than DNA, and the detection sensitivity ...

Claims

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

Application Information

Patent Timeline
no application Login to View More
Patent Type & Authority Patents(China)
IPC IPC(8): C12Q1/686C12Q1/6886C12N15/10
CPCC12Q1/686C12Q1/6886C12Q2600/156C12Q2525/204C12Q2527/101
Inventor 郭金海常爽爽刘进稳曾沃坦
Owner 北京东方亚美基因科技研究院有限公司