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Method for quickly amplifying target genes from genome DNA

A genome and gene technology, applied in the field of genetic engineering, can solve the problems of expensive, cumbersome PCR amplification, low copy number, etc.

Inactive Publication Date: 2010-08-11
北京良润生物科技有限公司
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Traditional PCR amplification is cumbersome, because the genome contains introns, and the low copy number of some special genes, plus some other uncertain factors, it is almost impossible to directly amplify the target gene from genomic DNA , so it is generally extracted from tissue RNA, reverse-transcribed to synthesize cDNA, and then the target gene is amplified by traditional PCR technology
However, the RNA extraction process has strict requirements and is easy to fail; in addition, some tissues containing the target gene are difficult to obtain, so this method has certain limitations
Although the target gene can be obtained by chemical synthesis, if the required gene fragment is long, the cost of synthesis will be very expensive

Method used

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  • Method for quickly amplifying target genes from genome DNA
  • Method for quickly amplifying target genes from genome DNA

Examples

Experimental program
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Effect test

Embodiment 1

[0018] Embodiment one: human α-glucosidase gene fragment amplification

[0019] 1. Preparation of human genomic DNA:

[0020] The blood samples of healthy people were donated by the Pediatric Laboratory of Fourth Medical University, and the whole blood genomic DNA extraction kit (solution type) was purchased from Changsha Lianbo Zhida Biotechnology Company. The genomic DNA extraction method was operated according to the kit instructions, and the obtained human genomic DNA was stored at -20°C for future use.

[0021] 2. Design of amplification primers for the 25th to 36th exon of human a-glucosidase gene:

[0022] According to the exon sequence information of the found human a-glucosidase gene (NM_004668.2), overlapping primers were designed for the 12 exons respectively, and the specific operations were as follows figure 1 As shown (only schematic diagram):

[0023] The primer sequences of the 12 exons are designed as follows:

[0024] Primer name

Primer seque...

Embodiment 2

[0041] Embodiment two: the cloning of human MICA gene

[0042] 1. Preparation of human genomic DNA:

[0043] The preparation method of human genomic DNA is the same as that in Example 1.

[0044] 2. Primer design for human MICA gene cloning:

[0045] According to the found exon sequence information of human a-glucosidase gene (NM_000247.1), overlapping primers were designed for the 6 exons respectively. The design principle is as follows figure 1 shown.

[0046] The primer sequences designed for the 6 exons are as follows:

[0047] Primer name

Primer sequence

base number

HMICA ex1F

CCCGAATTCCACTGCTTGAGCCGCTGAGA

29

HMICA ex1R

CTGTGGGGCTCAGCAGCAGCAGCTCCCGGA

27

HMICA ex2F

GCTGCTGCTGAGCCCCACAGTCTTCGTTAT

30

HMICA ex2R

GGGAATGCAAGCCTTCTTTCTGGTCCTTGA

30

HMICA ex3F

CAGAAAGAAGGCTTGCATTCCCTCCAGGAGA

31

HMICA ex3R

ATGGGGGGCACTGTTTCTCTCAGGACTA

26

HMICA ex4F

AGGAGAA...

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Abstract

The invention relates to the field of gene engineering, in particular to a method related to gene cloning. The method for quickly amplifying target genes from a genome DNA comprises the following steps of: (1) preparing the genome DNA; (2) designing amplification primers of gene exons; (3) carrying out exon amplification for respectively amplifying each exon; and (4) amplifying gene segments. In the invention, by using a special primer design method, required exons are firstly amplified from the genome and then purified and mixed, and the primers at both ends are used for amplifying the required target genes in a Touch-down program. The gene splicing method avoids the preparation of RNA and a process of synthesizing cDNA by reverse transcription, thus the gene cloning can be quickly and accurately finished within several hours. Meanwhile, any cDNA sequence the sequence information of which is known can be cloned by applying the method, and the amplification length is not limited.

Description

technical field [0001] The invention relates to the field of genetic engineering, in particular to a method for gene cloning. Background technique [0002] Currently, there are two commonly used methods for amplifying target genes: PCR amplification and gene synthesis. Traditional PCR amplification is cumbersome, because the genome contains introns, and the low copy number of some special genes, plus some other uncertain factors, it is almost impossible to directly amplify the target gene from genomic DNA , so it is generally extracted from tissue RNA, reverse-transcribed to synthesize cDNA, and then the target gene is amplified by traditional PCR technology. However, the RNA extraction process has strict requirements and is easy to fail; in addition, some tissues containing the target gene are difficult to obtain, so this method has certain limitations. Although the target gene can be obtained by chemical synthesis, the cost of synthesis will be very expensive if the requ...

Claims

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Application Information

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IPC IPC(8): C12N15/10
Inventor 支旭勃郭海荣王俊刘磊
Owner 北京良润生物科技有限公司
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