Looking for breakthrough ideas for innovation challenges? Try Patsnap Eureka!

Fragile X syndrome FMR1 gene detection primer, kit and detection method

A gene detection and syndrome technology, applied in biochemical equipment and methods, microbial determination/inspection, DNA/RNA fragments, etc. Effect

Inactive Publication Date: 2019-02-19
深圳会众生物技术有限公司
View PDF3 Cites 4 Cited by
  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0017] The technical problem to be solved by the present invention is to provide a detection primer for Fragile X syndrome FMR1 gene, which can distinguish female homozygotes and heterozygotes, and solve the problem that conventional PCR methods cannot distinguish homozygotes and heterozygotes;

Method used

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
View more

Image

Smart Image Click on the blue labels to locate them in the text.
Viewing Examples
Smart Image
  • Fragile X syndrome FMR1 gene detection primer, kit and detection method
  • Fragile X syndrome FMR1 gene detection primer, kit and detection method
  • Fragile X syndrome FMR1 gene detection primer, kit and detection method

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0067] The detection situation of kit of the present invention to clinical sample

[0068] Using the kit of the present invention to detect 300 clinical samples, the test results of the clinical samples detected by the kit of the present invention are shown in Table 8 below.

[0069] Table 8

[0070] genotype

Quantity (example)

normal

212

premutation

83

full mutation

5

[0071] The kit of the present invention compares the detection results of 300 clinical samples with the sequencing results, and the positive coincidence rate and negative coincidence rate are both 100%, and the accuracy rate reaches 100%. .

[0072] Table 9

[0073]

[0074] Note: Positive in the Southern blot result means that the genotype within the detection range of the kit of the present invention is positive, and negative means that other genotype samples outside the detection range of the kit of the present invention are positive or negative.

[007...

Embodiment 2

[0088] Clinical application of kit of the present invention

[0089] 1. Intended use

[0090] This kit is used for the qualitative detection of human whole blood genomic DNA samples in vitro, and can detect three common loci in Chinese, as shown in Table 10 below:

[0091] Table 10

[0092]

[0093]

[0094] 2. Inspection principle

[0095] This kit product adopts improved multiplex PCR combined with capillary electrophoresis technology.

[0096] Three-primer PCR: use the three-primer PCR method to design specific primers for the different CGG regions of the 5' non-coding region of the FMR1 gene and specific primers for the CGG repeat region to amplify fragments with different repeat numbers, which can reduce the annealing temperature of the high GC region The GCbuffer was used to optimize the conditions of the PCR system, and combined with the optimized PCR program, the CGG regions with different repeat numbers were accurately amplified.

[0097] Capillary electroph...

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

PUM

No PUM Login to View More

Abstract

The invention relates to a fragile X syndrome FMR1 gene detection primer, a kit and a detection method. The fragile X syndrome FMR1 gene detection primer comprises the specific primers F1 and F2 for amplifying the FMR1 gene 5' non-coding region, wherein the nucleotide sequence of the specific primers F1 and F2 is shown by SEQ ID No. 1-2; and the primer F3 for amplifying the CGG repeat region, wherein the nucleotide sequence of the primer F3 is shown by SEQ ID No. 3. The fragile X syndrome FMR1 gene detection kit can solve the problem that the long FMR1 gene fragment cannot be amplified due tohigh CG content, and the sensitivity of the fragile X syndrome FMR1 gene detection kit is 875 times of that of the Southern hybridization.

Description

technical field [0001] The invention relates to gene detection technology, in particular to a detection primer, kit and detection method for fragile X syndrome FMR1 gene. Background technique [0002] Fragile X syndrome (fragile X syndrome, FXS) is one of the most common inherited mental retardation diseases, with an incidence of about 1 / 4000 males and 1 / 6000 females (1 / 5000-1 / 8000). second only to Down syndrome. The molecular genetic basis of Fragile X syndrome is the 5' untranslated region (CGG) n trinucleotide of Fragile X mental retardation gene 1 (Fragile X mental retardation gene 1, FMR1, OMIM: 309550, located at Xq27.3) Abnormal expansion of repetitive sequences and methylation of CpG islands in the promoter region, but the relationship between the two is not yet clear. More than 95% of FXS patients are caused by the CGG repeat mechanism, and less than 5% of FXS patients are caused by missense mutations and deletion mutations of the FMR1 gene that affect the normal ...

Claims

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

Application Information

Patent Timeline
no application Login to View More
IPC IPC(8): C12Q1/6883C12Q1/686C12N15/11
CPCC12Q1/686C12Q1/6883C12Q2600/16C12Q2537/143C12Q2525/117
Inventor 刘福平刘晶晶
Owner 深圳会众生物技术有限公司
Who we serve
  • R&D Engineer
  • R&D Manager
  • IP Professional
Why Patsnap Eureka
  • Industry Leading Data Capabilities
  • Powerful AI technology
  • Patent DNA Extraction
Social media
Patsnap Eureka Blog
Learn More
PatSnap group products