Continuous learning method and system for biomacromolecular particle recognition of cryoelectron microscope

A biological macromolecules and cryo-electron microscopy technology, applied in the field of cryo-electron microscopy, can solve problems such as large data volume and storage pressure, and achieve the effect of reducing training time, enhancing feature recognition range and recognition accuracy

Pending Publication Date: 2021-11-12
TSINGHUA UNIV
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Problems solved by technology

However, the amount of data used for joint training will become larger and larger, leading to the following problems. First, it will put pressure on storage and require a long-term maintenance of a large number of training data sets. getting longer

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  • Continuous learning method and system for biomacromolecular particle recognition of cryoelectron microscope
  • Continuous learning method and system for biomacromolecular particle recognition of cryoelectron microscope
  • Continuous learning method and system for biomacromolecular particle recognition of cryoelectron microscope

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Embodiment Construction

[0038] In order to make the purpose, technical solutions and advantages of the present invention clearer, the technical solutions in the present invention will be clearly and completely described below in conjunction with the accompanying drawings in the present invention. Obviously, the described embodiments are part of the embodiments of the present invention , but not all examples. Based on the embodiments of the present invention, all other embodiments obtained by persons of ordinary skill in the art without creative efforts fall within the protection scope of the present invention.

[0039] In the existing learning method for biomacromolecular particle recognition in cryo-electron microscope images, the training method of fine-tuning the deep learning network is adopted. When new data comes, the new data is used for training on the basis of the old data training model. This method avoids the use of old data sets, the training efficiency is relatively high, and there is no...

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Abstract

The invention provides a continuous learning method and system for biomacromolecular particle recognition of a cryoelectron microscope. The method comprises the following steps: acquiring to-be-recognized cryoelectron microscope image data; and inputting the to-be-identified cryoelectron microscope image data into a trained network parameter model to obtain an identification result of the biomacromolecular particles, wherein the trained network parameter model is obtained by training a neural network according to example cryoelectron microscope sample image data and cryoelectron microscope sample image data obtained in a historical training process, and the example cryoelectron microscope sample image data and the cryoelectron microscope sample image data are labeled with biological macromolecular particle coordinate tags. The method does not need to store a large amount of old data sets, reduces the single training time, and can continuously enhance the feature recognition range and recognition precision of particle selection.

Description

technical field [0001] The invention relates to the technical field of cryo-electron microscopy, in particular to a continuous learning method and system for identifying biomacromolecular particles in a cryo-electron microscope. Background technique [0002] Cryo-electron microscopy (cryo-EM for short) is a recently developed method for interpreting high-resolution structures of biological macromolecular complexes and cellular tissues. In structure elucidation, it is necessary to be able to identify the biomacromolecular particles of interest in cryo-electron microscopy images before further structural elucidation. [0003] During the use of the cryo-electron microscope system, different biological samples will be processed continuously, thereby continuously generating new data. In each batch of new data, a part needs to be selected for training the network and obtaining a new model. With the use of the electron microscope for a long time, the accumulated training data wil...

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): G06T7/00G06N3/08
Inventor 李雪明沈渊陈健生张馨予赵天放
Owner TSINGHUA UNIV
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