Detection primer group, detection kit, and detection method used for simultaneous detection of three pathogenic bacteria of marine fishes
A technology for detection kits and detection primers, applied in biochemical equipment and methods, recombinant DNA technology, microbiological determination/inspection, etc., can solve the problems that cannot meet the timely diagnosis, sensitivity and specificity, low detection sensitivity, and delayed disease. Diagnosis and other issues to achieve the effect of reducing the risk of disease outbreaks, rapid pathogen detection, and reducing labor costs
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Embodiment 1
[0039] The extraction of embodiment 1 bacterial genome DNA
[0040] Nocardia, Vibrio harveylius and Streptococcus iniae were collected from yellowtail (self-preserved in the Fishery Biological Diseases Laboratory of South China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences), and the DNA was extracted by the following steps:
[0041] (1) Resuspend the bacteria with 500-550 μL of TE buffer;
[0042] (2) Add 30 μL of 10% SDS and 15 μL of proteinase K (20 mg / mL) to the solution resuspended in step (1), mix well and incubate at 37° C. for 1 h;
[0043] (3) Add 100 μL of 5mol / L NaCl solution to the solution incubated in step (2), mix well and then add 80 μL of NaCl solution of LCTAB (dissolve CTAB in 0.5mol / L of NaCl solution, CTAB and all The mass volume ratio of the above NaCl solution is 1:20), and incubated at 65°C for 20min;
[0044] (4) Add phenol-chloroform-isoamyl alcohol (the volume ratio of phenol, chloroform and isoamyl alcohol is 25:24 to the so...
Embodiment 2
[0048] Example 2 Design and Effectiveness Detection of Primer Sets for Triple PCR Detection of Yellowtail Nocardia, Vibrio Harvey and Streptococcus iniae
[0049] 1. Select the specific genes of Nocardia japonica, Vibrio harveylius and Streptococcus iniae respectively, and use PrimerPremier5.0 software to analyze and design corresponding primer pairs. Each primer pair can specifically identify the above-mentioned bacteria respectively specificity, the primer sequences are as follows:
[0050]
[0051]
[0052] 2. Effectiveness testing:
[0053] (1) Synthesize the primer set of above-mentioned design, use the primer of primer set to carry out single PCR verification respectively to the DNA of Nocardia japonica, Vibrio harveylius and Streptococcus iniae that embodiment 1 extracts, and wherein single PCR reaction system is as follows :
[0054]
[0055] (2) Simultaneously perform triple PCR verification on Nocardia spp., Vibrio harveii and Streptococcus iniae, using th...
Embodiment 4
[0067] Embodiment 4 detection kit
[0068] The detection kit of this embodiment can be used for rapid diagnosis of triple PCR whether the sample contains Nocardia japonica, Vibrio harvei and Streptococcus iniae. Primer set for detection of Streptococcus iniae, proteinase K, SDS solution, phenol-chloroform-isoamyl alcohol mixed solution, isopropanol, ethanol with a volume concentration of 70%, TE buffer solution, NaCl solution of CTAB, positive control substance and PCRDsMix consists of:
[0069] (1) Primer set for detection of Nocardia spp., Vibrio harveii and Streptococcus iniae: 1 tube contains primers Ns-mceF and Ns-mceR for Nocardia spp., the nucleotide sequences of which are shown in SEQ ID NO. 1 and shown in SEQIDNO.2; Vibrio Harvey primers Vh-toxF and Vh-toxR are installed in 2 tubes, and their nucleotide sequences are shown in SEQIDNO.3 and SEQIDNO.4 respectively; Streptococcus iniae primer Si- The nucleotide sequences of itsF and Si-itsR are respectively shown in SE...
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