Cereblon ligands and bifunctional compounds comprising the same

a technology of ligands and e3 ligases, applied in the field ofimide-based compounds, can solve the problems of inability to target and modulate certain classes of proteins altogether, difficult to develop ligands of e3 ligases using small molecules, and notoriously difficult to target protein-protein interactions

Inactive Publication Date: 2018-08-16
ARVINAS OPERATIONS INC
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Benefits of technology

[0010]The present disclosure describes bifunctional compounds which function to recruit endogenous proteins to an E3 Ubiquitin Ligase for degradation, and methods of using the same. In particular, the present disclosure provides bifunctional or proteolysis targeting chimeric (PROTAC) compounds, which find utility as modulators of targeted ubiquitination of a variety of polypeptides and other proteins, which are then degraded and/or otherwise inhibited by the bifunc

Problems solved by technology

On the other hand, protein-protein interactions are notoriously difficult to target using small molecules due to their large contact surfaces and the shallow grooves or flat interfaces involved.
The development of ligands of E3 ligases has proven challenging, in part due to

Method used

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  • Cereblon ligands and bifunctional compounds comprising the same
  • Cereblon ligands and bifunctional compounds comprising the same
  • Cereblon ligands and bifunctional compounds comprising the same

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examples

[1314]A. Protein Degradation Bioassays:

[1315]The following bioassays evaluate the level of protein degradation observed in various cell types using representative compounds disclosed herein.

[1316]In each bioassay, cells were treated with varying amounts of compounds encompassed by the present disclosure. The degradation of the following proteins may be evaluated: estrogen receptor α (ERα), bromodomain-containing protein 4 (BRD4), androgen receptor (AR), and BRaf protein.

[1317]1. ERE Luciferase Assay for Compounds in Table 5.

[1318]T47D-KBlue cells (ATCC® #CRL_2865, T47D human breast cancer cells stably transfected with estrogen responsive element / promoter / luciferase reporter gene) were seeded into 96-well white opaque plates in RPMI growth medium supplemented with 10% fetal bovine serum (FBS) and allowed to adhere overnight in a 37° C. humidified incubator. The following day, cells were treated with PROTACs in a 12-point concentration curve (top final concentration of 300 nM with sub...

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Abstract

The description relates to cereblon E3 ligase binding compounds, including bifunctional compounds comprising the same, which find utility as modulators of targeted ubiquitination, especially inhibitors of a variety of polypeptides and other proteins which are degraded and/or otherwise inhibited by bifunctional compounds according to the present disclosure. In particular, the description provides compounds, which contain on one end a ligand which binds to the cereblon E3 ubiquitin ligase and on the other end a moiety which binds a target protein such that the target protein is placed in proximity to the ubiquitin ligase to effect degradation (and inhibition) of that protein. Compounds can be synthesized that exhibit a broad range of pharmacological activities consistent with the degradation/inhibition of targeted polypeptides of nearly any type.

Description

CROSS-REFERENCE TO RELATED APPLICATIONS[0001]The present disclosure is a Continuation-in-Part of U.S. Non-Provisional application Ser. No. 14 / 686,640, filed 14 Apr. 2015, which claim priority to U.S. Provisional Application No. 61 / 979,351, filed 14 Apr. 2014, and a Continuation-in-Part of U.S. Non-Provisional application Ser. No. 14 / 792,414, filed 6 Jul. 2015, which claims priority to U.S. Provisional Application No. 61 / 979,351, filed 14 Apr. 2014, and U.S. Provisional Application No. 62 / 171,090, filed 4 Jun. 2015, all of which are incorporated herein by reference in their entirety.INCORPORATION BY REFERENCE[0002]U.S. patent application Ser. No. 15 / 230,354, filed on Aug. 5, 2016, published as U.S. Patent Application Publication No. 2017 / 0065719; and U.S. patent application Ser. No. 15 / 801,243, filed on 1 Nov. 2017; and U.S. patent application Ser. No. 15 / 206,497 filed 11 Jul. 2016; and U.S. patent application Ser. No. 15 / 209,648 filed 13 Jul. 2016; and U.S. patent application Ser. N...

Claims

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Application Information

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IPC IPC(8): A61K47/55C07D401/04C07D401/14C07D471/04A61K31/437A61K31/496A61K31/551A61K45/06A61K31/501A61K31/506A61K31/497
CPCA61K47/55C07D401/04C07D401/14C07D471/04A61K31/437A61K31/497A61K31/551A61K45/06A61K31/501A61K31/506A61K31/496A61K47/545A61P35/00
Inventor CREW, ANDREW P.CREWS, CRAIG M.DONG, HANQINGHORNBERGER, KEITH R.WANG, JINGQIAN, YIMINZIMMERMANN, KURTBERLIN, MICHAELSNYDER, LAWRENCE B.
Owner ARVINAS OPERATIONS INC
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