MiRNA composition and kit therefore for diagnosis of early hepatocellular carcinoma
A technology of early liver cancer and kits, applied in the field of medical biological detection, can solve the problems of low sensitivity, increased AFP, and low detection throughput
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Embodiment 1
[0069] Example 1. Cohort screening of specific miRNAs molecular markers that can predict the possibility of liver cancer in high-risk groups of patients with viral hepatitis
[0070] The annual physical examination cohort of nearly 10,000 chronic HBsAg-positive patients was studied, and the serum of patients with liver cancer diagnosed half a year to one and a half years ago was collected to screen for differential expression compared with those without liver cancer miRNAs profile, screening specific miRNAs molecular markers that can predict the possibility of liver cancer in high-risk groups of patients with viral hepatitis.
[0071] The main plasma samples used in the study came from the Eastern Hepatobiliary Surgery Hospital, collected from a cohort of annual physical examinations from April 2007 to March 2014, including 9287 chronic hepatitis B surface antigen (HBsAg) positive (HBsAg-positive) patients . During the physical examination of these participants, HBsAg, alanin...
Embodiment 2
[0086] Example 2. Preparation of detection reagents and detection of training set patient serum
[0087] Based on the five miRNAs identified above, detection reagents were designed to identify early or very early liver cancer by detecting the five miRNAs.
[0088] 1. Primer design
[0089] Design the following reverse transcription primers and upstream and downstream primers and probes:
[0090] For hsa-miR-193a-3p:
[0091] Reverse transcription primer: 5'-CTCAACTGGTGTCGTGGAGTCGGCAATTCAGTTGAGACTGGGACTTTG-3'(SEQ ID NO: 6);
[0092] Upstream primer: 5'-ACACTCCAGCTGGGAACTGGCCTACAAAGT-3' (SEQ ID NO: 7);
[0093] Downstream primer: 5'-GTACGACTCACTATAGGGACTCAACTGGTGTCGTGGAG-3' (SEQ ID NO: 8);
[0094] Probe: 5'-TTCAGTTGAGACTGGGACTTTG-3' (SEQ ID NO: 9). The probe has FAM at its 5'-end; BHQ at its 3'-end.
[0095] For hsa-miR-369-5p:
[0096] Reverse transcription primer: 5'-CTCAACTGGTGTCGTGGAGTCGGCAATTCAGTTGAGGCGAATATAACAC-3'(SEQ ID NO: 10);
[0097] Upstream primer: 5'-ACAC...
Embodiment 3
[0149] Embodiment 3, prepare a kind of kit of the present invention
[0150] In this embodiment, with the detection reagent designed in Example 2, a kit comprising the following components or components was prepared: RNA extraction reagents, reverse transcription reagents for each miRNAs to be tested and internal reference, for each miRNAs to be tested and Internal reference PCR amplification upstream primers and downstream primers, RNase-free pure water, negative quality control, positive quality control.
[0151] 1. RNA extraction reagent: Trizol reagent (LifeTechnologies company, U.S.) was used in this embodiment;
[0152] 2. Reverse transcription primers, forward primers, reverse primers, oligonucleotide probes, and positive controls were synthesized by Shanghai Sangon Biotechnology Co., Ltd.;
[0153] 3. Reverse transcriptase M-MLV, reverse transcription reaction system, nucleic acid amplification enzyme and quantitative PCR reaction system were purchased from Life Techn...
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