Probe set for detecting pathogenicity/susceptibility genes of sudden cardiac death
A sudden cardiac death and susceptibility gene technology, applied in the fields of genetic engineering and molecular genetics, can solve problems such as high incidence, heavy economic burden, and lagging progress
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Embodiment 1
[0076] Embodiment 1 Design and preparation of the probe set of the present invention 1. Screening of pathogenic and / or susceptibility genes
[0077] The pathogenic and / or susceptible genes in this example are: KCNQ1, KCNH2, SCN5A, ANK2, KCNE1, KCNE2, KCNJ2, CACNA1C, CAV3, SCN4B, AKAP9, SNTA1, KCNJ5, CALM1, CALM2, KCNE3, RYR2, CASQ2 , TRDN, LMNA, CACNA2D1, CACNB2, GPD1L, SCN1B, SCN3B, HCN4, KCND3, SCN10A, KCNJ8, ABCC9, SCN2B, PKP2, TRPM4, RANGRF, NKX2-5, PRKAG2, DES, EMD, NUP155, JPH2, DPP6, MYH6 , TNNT2, TTN, PLN, MYH7, RBM20, BAG3, MYBPC3, SGCD, VCL, CSRP3, ACTN2, LDB3, TPM1, DMD, ACTC1, TNNI3, TAZ, TCAP, TMPO, PSEN1, FKTN, TNNC1, DSG2, NEXN, CRYAB , LAMA4, RAF1, SDHA, GATAD1, EYA4, PSEN2, ANKRD1, CTF1, DSC2, DSP, DTNA, TGFB3, TMEM43, JUP, NOS1AP, MYL3, MYL2, MYOZ2, CALR3, MYLK2, MAP2K1, GLA, BRAF, SLC25A4, SOS1 , FHL2, LAMP2, PTPN11, KRAS, NRAS, SHOC2, TTR, HRAS, HADHA, CBS, FBN1, TGFBR1, TGFBR2, FBN2, COL3A1, COL5A1, COL5A2, MYH11, ACTA2, SMAD3, SLC2A10, ELN, RPSA, and CAC...
Embodiment 2
[0084] Embodiment 2: Composition, preparation and use of the kit of the present invention.
[0085] The kit for detecting the pathogenic and / or susceptibility genes of sudden cardiac death described in this embodiment is to carry out the molecular inheritance of the individual under examination by detecting the mutations of the above-mentioned 116 pathogenic and / or susceptibility genes. Kits for medical diagnosis or risk prediction.
[0086] 1. The composition of the kit
[0087] The components contained in the kit are: the probe set obtained in Example 1 (160 μL, 150 ng / μL), enrichment buffer (208 μL), hybridization buffer (800 μL), binding buffer (3.2 mL), washing Solution 1 (9mL), rinse solution 2 (45mL), NaOH solution (0.1M, 1mL), Tris-HCl buffer (1M, pH 7.5, 1.2mL), PCR reaction solution (580μL), TE buffer (800μL, 10mM Tris-HCl, 1mM EDTA, adjust the pH to 8.0, and adjust the volume to 500mL with water). Wherein each buffer composition is as follows:
[0088] (1) Enric...
Embodiment 3
[0136] Embodiment 3: verification of the use effect of the kit of the present invention
[0137] Utilize the kit of the present invention (prepared and obtained in Example 2) to detect 72 cases of samples, the results confirm that the capture rate of the target disease-causing and / or susceptibility genes is satisfactory, the average effective sequencing data volume of the target region reaches 243.87Mb, and the target region’s The average sequencing depth is 483.45X (see Table 1), much higher than the general genetic disease diagnosis requirements (generally 20X).
[0138] Table 1 The quality of sequencing data for pathogenic and / or susceptibility genes
[0139]
[0140]
[0141] In summary, the probe set and kit for detecting the pathogenic / susceptibility genes of sudden cardiac death provided by the present invention have the characteristics of simple operation, low cost, good specificity, high sensitivity, etc., and can simultaneously detect up to, Various types of m...
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