Reagents, kits and applications for detection of Escherichia coli o157:h7 serotype pathogenic bacteria

A technology for detection reagents and detection methods, which is applied in the detection field of molecular biology methods, can solve the problems of insufficient sensitivity, high value, and contamination of laboratory nucleic acid dyes, so as to reduce costs and convenience, improve detection sensitivity, and improve sensitivity. Effect

Active Publication Date: 2021-01-15
北京源景泰科生物科技有限公司
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

However, the main limitation of this method is that the culture period of several days can provide accurate information on the nature of the strain or the isolate itself. PCR has been widely used to detect E. coli O157:H7 from food and environmental samples. Recently, real-time PCR has been used because of its enhanced The sensitivity and specificity and fast turnaround time are becoming more and more popular. The existing fluorescent quantitative method for detecting E. coli O157:H7 has a detection sensitivity of 80 CFU / ml, but the fluorescent quantitative PCR instrument used is expensive and expensive to use , still cannot meet the monitoring requirements at the grassroots level
The traditional PCR instrument needs to combine the gel electrophoresis method to analyze the size and brightness of the bands to judge, not only the detection sensitivity is not as good as the fluorescence quantitative PCR, but also there are cumbersome gel electrophoresis operation steps and the contamination of laboratory nucleic acid dyes
With the popularization of traditional PCR technology and the development of portable instruments, field detection becomes possible, but gel electrophoresis to observe the results is time-consuming and laborious and has certain biological hazards, which requires high requirements for experimental operators. Therefore, a traditional PCR-based method is urgently needed. Portable, rapid, sensitive, safe, and visualized detection methods to respond to future outbreaks in a timely and effective manner must have sufficiently sensitive, specific, and reliable methods for the rapid and convenient detection of E. coli O157:H7

Method used

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  • Reagents, kits and applications for detection of Escherichia coli o157:h7 serotype pathogenic bacteria
  • Reagents, kits and applications for detection of Escherichia coli o157:h7 serotype pathogenic bacteria
  • Reagents, kits and applications for detection of Escherichia coli o157:h7 serotype pathogenic bacteria

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0084] The enzyme activity and color development effect of the G-quadruplex nucleic acid mimetic complex formed by different G-quadruplex nucleic acid sequences were tested.

[0085] 1 Materials and methods

[0086] 1.1 Materials

[0087] G1-G6 six G-quadruplex nucleic acid sequences were synthesized by Nanjing Qingke Biotechnology Co., Ltd.

[0088] 1.2 List of G-quadruplex nucleic acid sequences

[0089] Table Sequence for assay

[0090]

[0091] 1.3 Operation method

[0092] 1) diluting the synthetic G-quadruplex nucleic acid sequence to a concentration of 1 μM;

[0093] 2) Take 10 μL of the G-quadruplex nucleic acid sequence sample and potassium chloride 2ul (35mM), Hemin 1.33ul (4.5uM), HEPES buffer 6.67ul and mix to form the first mixed system, the first mixed system at 95 Heat at around ℃ for 4 minutes to melt, then quickly cool down to below 4℃ and incubate for 10 minutes;

[0094] 3) Add 90ul each of color developing solution A and color developing B solution...

Embodiment 2

[0098] To test the specific identification of Escherichia coli 0157:H7 in different foodborne pathogenic bacteria contamination.

[0099] 1 Materials and methods

[0100] 1.1 Materials

[0101] Foodborne pathogens of different strains were isolated and identified by the Laboratory of Veterinary Medicine College of Nanjing Agricultural University.

[0102] 1.2 Primer design

[0103] 1.3 PCR amplification system:

[0104]

[0105] Reaction conditions:

[0106]

[0107] 1.4 Operation method

[0108] Resuscitate cultures of different strains, count the number of colonies using plates, extract bacterial DNA, and use the above (1.3) PCR reaction system for Escherichia coli O157:H7, Enterobacter sakazakii, Salmonella typhi, Vibrio parahaemolyticus, Staphylococcus aureus, After PCR amplification of Enterococcus faecalis, Listeria monocytogenes and ultrapure water, the specificity among different species was verified by gel electrophoresis and G-quadruplex nucleic acid mimet...

Embodiment 3

[0115] Specific identification of Escherichia coli 0157:H7 among different serotypes of the genus Escherichia coli.

[0116] 1 Materials and methods

[0117] 1.1 Materials

[0118] Escherichia coli is a pathogenic bacteria of different serotypes of Escherichia coli.

[0119] 1.2 Primer design

[0120] 1.3 PCR amplification system:

[0121]

[0122]

[0123] Reaction conditions:

[0124]

[0125] 1.4 Operation method

[0126] Escherichia coli of different serotypes was revived and cultured, and the number of colonies was counted on a plate, and the bacterial DNA was extracted, and the above (1.3) PCR reaction system was used for Escherichia coli O157:H7, O2:K1:H7, O132:H7, O141:K85:H4 , O55:K54, O125:K67 and ultrapure water were amplified by PCR respectively, and the specificity between different serotypes was verified by gel electrophoresis and G-quadruplex nucleic acid imitation enzyme colorimetry.

[0127] 1) Take 10 μL of PCR product, mix with potassium chlor...

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Abstract

The invention discloses a reagent, a kit and application for detection of escherichia coli O157:H7 serotype pathogenic bacteria. The detection reagent comprises a primer pair mainly composed of a first primer and a second primer, and the sequences of the first primer and the second primer are correspondingly shown in SEQ ID NO:1 and SEQ ID NO:2. According to the detection reagent, whether the escherichia coli O157:H7 exists in a sample to be detected can be directly and simultaneously judged by naked eyes through color change generated by the oxidation-reduction reaction of substrates catalyzed through G-quadruplex nucleic acids mimic enzymes, the sensitivity of detecting foodborne pathogens is improved, dual strategies of introducing enzyme cycle signal amplification and PCR product amplification by using G-quadruplex nucleic acids mimic enzymes are used for achieving the amplification of a final signal, and the visual detection of escherichia coli O157:H7 is realized.

Description

technical field [0001] The invention particularly relates to a reagent, kit and application for detection of Escherichia coli O157:H7 serotype pathogenic bacteria, belonging to the technical field of detection of molecular biology methods. Background technique [0002] The public health problem caused by foodborne pathogenic microorganisms is a major problem in the world, and its missed detection rate is as high as 95%. According to WHO estimates, no less than 2 million deaths are caused by foodborne microbial infectious diarrhea worldwide each year, most of which are due to microbial contamination of diet and drinking water. Enterohemorrhagic Escherichia coli (EHEC) in food sources Sexually pathogenic microorganisms occupy an important hygienic position. [0003] EHEC Escherichia coli O157:H7 mainly exists in the intestinal tract of livestock and poultry for a long time, and human beings have been reported to be ill all over the world. Escherichia coli O157:H7 infection c...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): C12Q1/689C12Q1/686C12Q1/10C12N15/11
CPCC12Q1/686C12Q1/689C12Q2527/125C12Q2525/173
Inventor 薛峰陈诗胜戴建君陈伟蒋原曾德新任建鸾汤芳余晓峰
Owner 北京源景泰科生物科技有限公司
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