SNP pathogenic factors and disease association model establishment method
A technology of causative factors and association relationships, applied in the field of data processing, can solve the problems of accuracy impact, high modeling difficulty, low model accuracy, etc., to achieve the effect of accurate association relationship model, reduce the degree of mutual influence, and simple operation
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[0143] A.Dat100 dataset
[0144] This set of experimental data comes from the New York City Cancer Control Project. For this set of data, biologists embedded a total of 7 SNP pathogenic factors in the data Dat100 of 100 SNPs and 2000 samples at the same time, namely SNP pathogenic factors (98), (78), (6093), (4475), (8583100), (972047), (2581879299) (the 7 causative factors are respectively numbered 1, 2,..., 7 below), each causative factor is associated with the probability of the disease are given.
[0145] The establishment of the relationship model between each SNP pathogenic factor and disease in this set of data is completed by the technology of the present invention. Figure 5 to Figure 8 Histogram of modeling results by AD-DTEM method for the top six causative factors in the Dat100 dataset.
[0146] The present invention also uses the known real SNP pathogenic factor and disease correlation model on the set of experimental data, and the accuracy of the evaluation in...
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