Lead compound serving as ANKRD22 inhibitor and application thereof
A technology of leading compounds and inhibitors, applied in the field of compounds, can solve the problems such as ANKRD22 inhibitors that have not been reported yet, and achieve the effects of less resistance to drug resistance, saving experimental costs and less workload.
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Embodiment 1
[0055] Example 1. Establishment of a computerized drug screening system for ANKRD22.
[0056] In this example, the computer drug screening system for ANKRD22 was constructed using the Chemdiv (Version 2019) database as a compound library for virtual screening, which contains 1,535,478 small molecule compounds, and the database has skeleton diversity. In order to ensure the global conformation of small molecules during the virtual screening process, this example uses the plug-in omega in the openeye software to generate small molecule conformations, and an average of about 50 conformations are generated for each small molecule. Finally, the molecules of Chemdiv were transformed into 50,679,311 molecular conformations and saved.
Embodiment 2
[0057] Example 2. Use the computer drug screening system of Example 1 to screen the compounds with high affinity to the active site of ANKRD22 from the database.
[0058] Molecular docking is one of the important methods of molecular simulation, its essence is the recognition process between two or more molecules, and the process involves spatial matching and energy matching between molecules. Molecular docking methods are widely used in drug design, material design and other fields. The virtual screening that this embodiment carries out is carried out on the workstation (CPU:40; Memory:64; SSD) that installs Ubuntu kylin 15.10 operating system, uses virtual screening software FRED to carry out virtual screening to the homologous modeling structure of ANKRD22, wherein operating parameters For example, both placement and scoring functions use default parameters. Translational Rotational
[0059] The step of molecular docking-based virtual screening is to screen the small ...
Embodiment 3
[0060] Example 3. ANKRD22 inhibitors have no obvious cytotoxicity within the effective dose range.
[0061] The toxic effect of the ANKRD22 inhibitor prepared in Example 1 on SGC7901 gastric adenocarcinoma cells was determined by the MTS method. The SGC7901 cells used were from the Shanghai Cell Bank of the Chinese Academy of Sciences.
[0062] The MTS analysis method was used to measure the toxic effect of the ANKRD22 inhibitor SGC7901 agent prepared in Example 1 on gastric adenocarcinoma cells. 52 kinds of ANKRD22 inhibitors were used as test samples, and the OD value was measured at 490 nm by an enzyme-linked immunosorbent monitor. Draw the cell growth inhibition rate curve as the abscissa and the absorbance value as the ordinate, such as figure 2 shown.
[0063] Among them, the specific steps of the MTS analysis method are:
[0064] (1). Cell inoculation: a single cell suspension was prepared with culture medium containing 10% fetal bovine serum, and 1000-10000 cells p...
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