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Kidney and kidney tumor segmentation method based on deep neural network

A deep neural network and neural network technology, applied in the field of multi-class segmentation, can solve the problems of internal data structure loss, meaningless training, redundancy, etc., and achieve the effect of overcoming slow convergence, shortening training time, and reducing redundant information

Inactive Publication Date: 2020-06-30
TIANJIN UNIV
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AI Technical Summary

Problems solved by technology

In the task of segmenting kidneys and kidney tumors, there is a problem with CT images: most of the data slices do not contain kidneys or kidney tumors, so if all the slices are sent to the neural network for training, there will be a lot of meaningless training , there will be a lot of redundant information
In the segmentation process of medical images, if the convolution kernel only uses ordinary convolution, it will lead to the loss of internal data structure and the loss of spatial level information

Method used

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  • Kidney and kidney tumor segmentation method based on deep neural network
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  • Kidney and kidney tumor segmentation method based on deep neural network

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Embodiment Construction

[0027] The invention is a kidney and kidney tumor segmentation method based on a densely connected neural network and a U-net neural network. Below in conjunction with accompanying drawing this technical scheme is described in detail in detail:

[0028] The first step is to build a CT medical image database:

[0029] The data used is the public Kits19 challenge [8] There are a total of 300 patients in the data set, and the data set labels are 000 to 299, of which 0 to 209 are the training sets of 210 patients. Each training set has a field data label marked by a professional doctor, such as figure 1 , the doctor marked the patient's image, and segmented the kidney and the tumor attached to the kidney from other backgrounds. The last 90 images, that is, 210-299 images only contain image data, and we need to segment the specific kidney and tumor regions. The format of each data is (*, 512, 512), where the first dimension varies from person to person, first slice along the fir...

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Abstract

The invention relates to a kidney and kidney tumor segmentation method based on a deep neural network, and the method comprises the following steps: constructing a CT medical image data obtaininga CT medical image data set of a kidney cancer patient, and selecting an image containing a kidney and kidney tumor position region manually marked by a doctor in the data set as a training set; training a roughly segmented U-Net + + neural network; carrying out image enhancement; training a neural network of the improved Dense-Unet; sending the image into an improved Dense-Unet neural network tocarry out final segmentation training; in the training process, using an Adam optimizer to modify a learning rate gradient descent method into a Cosine function descent method, enabling a loss function to utilize a loss function combining Dice Loss with CrossEntropyLoss, wherein a performance evaluation index of the neural network is a Dice index.

Description

technical field [0001] The invention belongs to the field of image segmentation, and relates to a multi-category segmentation method for three-dimensional CT kidney medical images by using a neural network. Background technique [0002] Kidney and kidney tumor segmentation is a technical means to separate the kidney organ area and kidney tumor area from other healthy tissues in the three-dimensional medical images taken by patients with kidney cancer. [1] It pointed out that in 2018, more than 400,000 people worldwide were diagnosed with kidney cancer, and more than 175,000 patients died of kidney cancer. Using enhanced CT images to diagnose kidney cancer is a key and necessary step in medicine. Using image segmentation to automatically label patients' CT images can assist doctors in the diagnosis of tumor lesions in the kidney area, reducing the misdiagnosis rate and saving money. The time that doctors manually mark the tumor area can win treatment time for patients. [0...

Claims

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Application Information

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IPC IPC(8): G06T7/11G06T7/00G06N3/08G06N3/04
CPCG06T7/11G06T7/0012G06N3/08G06T2207/10081G06T2207/20081G06T2207/20084G06T2207/30084G06T2207/30096G06N3/045
Inventor 吕卫蒋育含褚晶辉
Owner TIANJIN UNIV