Plant-derived cytosine deaminases and application thereof to base editing system
A technology of cytosine deaminase and base editing, applied in the application field of gene editing, can solve the application of cytosine deaminase that has not been studied, the application of cytosine deaminase that has not been studied, the difference in function and tissue-specific expression And other issues
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Embodiment 1
[0047] Example 1: Base gene editing in rice using cytosine deaminase from Arabidopsis thaliana.
[0048] 1.1. Construction of gene editing vectors
[0049] The inventors of the present invention constructed the vector nCas9&AtCDA1&UGI. Wherein AtCDA1 is a cytosine deaminase derived from Arabidopsis thaliana, and its amino acid sequence is shown in sequence 1 in the sequence list.
[0050] The vector nCas9&AtCDA1&UGI used in this example is a circular plasmid, and its nucleotide sequence is shown as sequence 47 in the sequence listing. In the above sequence, the 93rd to 277th position is the nucleotide sequence of the PolyA terminator, the 318th to 1343rd position is the nucleotide sequence of the hygromycin phosphotransferase, and the 1378th to 2157th position is the nucleotide sequence of the 35S promoter Sequence, the 2452nd to 2706th is the nucleotide sequence of NOS terminator, the 2743rd to 2991st is the nucleotide sequence of UGI, the 3061st to 7161st is the nucleotid...
Embodiment 2
[0068] Example 2: Base gene editing in rice using cytosine deaminase APOBEC1 derived from rice.
[0069] 2.1 Construction of gene editing vector
[0070] The inventors of the present invention constructed the vector nCas9&APOBEC1&UGI. Wherein APOBEC1 is a cytosine deaminase derived from rice, and its amino acid sequence is shown in sequence 2 in the sequence list.
[0071] The vector nCas9&APOBEC1&UGI used in this example is a circular plasmid, and its nucleotide sequence is shown in sequence 48 in the sequence listing. Among the above sequences, the 93rd to 277th are the nucleotide sequence of the PolyA terminator, the 318th to 1343rd are the nucleotide sequence of the hygromycin, the 1378th to 2157th are the nucleotide sequence of the 35S promoter, and the 35S promoter is the nucleotide sequence of the 35S promoter. 2452 to 2706 are the nucleotide sequence of the NOS terminator, the 2743 to 2991 are the nucleotide sequence of UGI, the 3061 to 7161 are the nucleotide sequen...
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