SSR primer group developed on basis of zucchini transcriptome sequence and application of SSR primer group
A technology of transcriptome sequence and American pumpkin, applied in the biological field, can solve the problems of the influence of molecular marker quantity, etc., and achieve the effect of clear amplified bands, good repeatability and rich polymorphism
- Summary
- Abstract
- Description
- Claims
- Application Information
AI Technical Summary
Problems solved by technology
Method used
Image
Examples
Embodiment Construction
[0046] The present invention will be further described below in conjunction with the examples, but not limited thereto.
[0047] 1. Transcriptome data sources
[0048] The transcriptome data of American squash come from the results of Illumina high-throughput deep sequencing of the fruit by our research group in 2016. The samples were entrusted to Beijing Biomike Biotechnology Co., Ltd. for RNA-Seq transcriptome sequencing, and 83,650 Unigenes were assembled through the De Novo method as analysis data.
[0049] 2. Transcriptome SSR site identification and SSR primer design
[0050]Use the software MISA to search for SSR sites in the loofah transcriptome, the search criteria are: repeat unit length 2~6 bp, dinucleotide, trinucleotide, tetranucleotide, pentanucleotide and hexanucleotide The minimum number of repetitions was 6, 5, 5, 4, and 4, respectively. The Primer 3.0 software was used to design and evaluate primers for the sequence before and after the SSR repeat unit, an...
PUM
Abstract
Description
Claims
Application Information
- R&D Engineer
- R&D Manager
- IP Professional
- Industry Leading Data Capabilities
- Powerful AI technology
- Patent DNA Extraction
Browse by: Latest US Patents, China's latest patents, Technical Efficacy Thesaurus, Application Domain, Technology Topic, Popular Technical Reports.
© 2024 PatSnap. All rights reserved.Legal|Privacy policy|Modern Slavery Act Transparency Statement|Sitemap|About US| Contact US: help@patsnap.com