Method for preparing FISH probe of EGFR gene
A probe and gene technology, applied in the field of FISH probe preparation, can solve the problems of long detection time and mutual interference.
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[0119] A method for preparing a FISH probe library of EGFR gene, comprising the following steps:
[0120] (1) Prepare probe 1A and probe 1B;
[0121] (2) After digesting and breaking probe 1A and probe 1B obtained in step (1), respectively, use Taq DNA polymerase to complete the end and add the dA tail at the 3' end to obtain probe 2A and 2B respectively;
[0122] The enzyme cutting system is:
[0123] Reagent
Amount added
10×CutSmart Buffer
5μL
restriction endonuclease mix
2μL
Probe 1A or 1B (1ng / μL)
40μL
Taq DNA polymerase (5U / μL)
0.5μL
10mM dNTPs
1μL
wxya 2 o
1.5μL
[0124] The reaction conditions for enzyme digestion and interruption are: 37°C for 30 minutes, 72°C for 20 minutes, and 80°C for 20 minutes;
[0125] (3) Add adapters to the probes 2A and 2B obtained in step (2) to obtain probes 3A and 3B respectively;
[0126] The system of the ligation reaction is:
[0127]
[0128] ...
Embodiment 8
[0133] The condition of the connection reaction of embodiment 8 is:
[0134] temperature
time
16℃
60min
65℃
10min
4℃
∞
[0135] The ligation product was purified using the purification kit HiPure Nucleotide Remove Kit, the product was eluted with 25 μl of sterile ultrapure water, and 20 μl was taken for subsequent steps.
[0136] (4) performing asymmetric amplification on the probes 3A and 3B obtained in step (3) respectively to obtain a FISH probe library;
[0137] Asymmetric amplification reaction system:
[0138] Reagent
Amount added
5X EpiMark Hot Start Taq Reaction Buffer
10μL
dNTP Mixture (containing aminoallyl-dUTP)
3μL
Epimark Hot strat Taq DNA polymerase
0.25 μL
14.75 μL
Primer F (1μM)
1μL
Primer R (20μM)
1μL
Probe 3A or 3B
20 μL
[0139] Primer F and Primer R are:
[0140] name
Base sequence ...
Embodiment 1-10
[0153] Embodiment 1-10 is that on the basis of the basic embodiment, various parameters are adjusted to obtain the following embodiments:
[0154]
[0155]
[0156]
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