Specific target, primer, detection method and application for detecting vibrio parahaemolyticus

A hemolytic Vibrio, specific technology, applied in the dual real-time fluorescent PCR system, the field of Vibrio parahaemolyticus detection, can solve the problems of reduced detection efficiency and accuracy, and achieve the effect of high specificity

Active Publication Date: 2021-01-29
NANJING AGRICULTURAL UNIVERSITY
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Problems solved by technology

At present, the commonly used detection targets of Vibrio parahaemolyticus are tdh, trh, tlh, groEL and toxR genes, but the above-mentioned genes are found to have certain limitations or false detection rates in the actual application detection process, which makes the detection efficiency and accuracy The degree is reduced, and the advantages of the PCR method cannot be fully utilized

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  • Specific target, primer, detection method and application for detecting vibrio parahaemolyticus
  • Specific target, primer, detection method and application for detecting vibrio parahaemolyticus
  • Specific target, primer, detection method and application for detecting vibrio parahaemolyticus

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Embodiment Construction

[0062] The present invention will be further described below in conjunction with the examples. The experimental methods that do not indicate specific conditions in the following examples generally follow the known means in the art, or according to the manufacturer's suggested conditions, and the bacterial strains involved in the examples all belong to the prior art. , those skilled in the art can easily obtain from public or commercial sources.

[0063] 1. Screening of Vibrio parahaemolyticus serotype-specific genes

[0064] NCBI (National Center for Biotechnology Information) has included the complete genome sequences of different microorganisms that have completed sequencing work, from NCBI (https: / / www.ncbi.nlm.nih.gov / genome / microbes / ) genome The published complete genome sequences of 33 strains of Vibrio parahaemolyticus were downloaded from the public database (data as of November 23, 2019), the CDS sequence information of the 33 strains was summarized, and then the Blas...

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Abstract

The invention provides a specific target for detecting vibrio parahaemolyticus, a primer pair, a detection method and application. According to the method, specific gene sequences capable of being used for detection in vibrio parahaemolyticus are mined according to a primary screening result of a local database and a secondary screening result of online comparison, the mined specific target gene is combined with a traditional target gene to construct a dual real-time fluorescence PCR method, and PCR primer pairs are designed according to a self-screening target gene VPA1585 and a traditional target gene tlh. In order to ensure high specificity and sensitivity of the detection method, a dual real-time fluorescent PCR method is adopted, a PCR reaction system is reasonably optimized, and a third-generation saturated fluorescent dye SYTO Green 9 is innovatively used for replacing an unsaturated fluorescent dye SYBR Green in a traditional real-time fluorescent PCR system, so the vibrio parahaemolyticus can be rapidly and accurately identified.

Description

technical field [0001] The invention belongs to the technical field of food safety detection, and specifically relates to a specific target for detecting Vibrio parahaemolyticus, primers and applications based on the specific target VPA1585 and the traditional target tlh, and the combination of VPA1585 and tlh to construct The dual real-time fluorescent PCR system is a method for detecting Vibrio parahaemolyticus. Background technique [0002] Vibrio parahaemolyticus (Vibrio parahaemolyticus) is a human pathogen that is widely distributed in the marine environment and is often isolated from a variety of raw seafood. Consumption of unprocessed or undercooked seafood products contaminated with Vibrio parahaemolyticus May cause food poisoning and lead to the development of acute gastroenteritis, although gastroenteritis caused by Vibrio parahaemolyticus is usually self-limited, it can be dangerous in people with underlying medical conditions such as liver disease or immune dise...

Claims

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Application Information

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IPC IPC(8): C12Q1/689C12Q1/686C12N15/11C12Q1/04C12R1/63
CPCC12Q1/689C12Q1/686C12Q2600/16C12Q2537/143C12Q2561/113C12Q2563/107Y02A50/30
Inventor 别小妹胡安妥陆兆新孔梁宇
Owner NANJING AGRICULTURAL UNIVERSITY
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