Molecular marker linked with cucumis sativus peel gloss regulation gene and application
A technology of molecular markers and gene regulation, which is applied in the determination/inspection of microorganisms, biochemical equipment and methods, food processing, etc., can solve problems such as peel shortage, reduce workload, reduce planting scale, improve efficiency and accuracy sexual effect
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[0035] Example 1 Acquisition of Molecular Markers Linked to Regulatory Genes of Cucumber Pericarp Gloss
[0036] 1. GWAS analysis method
[0037] 1. Genome-wide association study (GWAS) is a method for overall association analysis of common genetic variation (single nucleotide polymorphism and copy number) genes in the whole genome. The population is the research object, based on the linkage disequilibrium (LD) between genes (loci) retained after long-term recombination, combining the diversity of target trait phenotypes with the polymorphism of genes (or marker loci) Through combined analysis, genetic loci or marker loci that are closely related to phenotypic variation and have specific functions can be directly identified. Deep resequencing was performed on 289 cucumber germplasms. The average sequencing depth was 15X, and a total of 2,352,638 SNP sites were obtained. After filtering, a total of 399,352 high-quality SNPs were finally obtained, and a comprehensive set of hi...
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