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Novel coronavirus sample base mutation automatic assessment method

A coronavirus, automatic evaluation technology, applied in the field of virus sample data analysis, can solve problems such as single function, unfavorable virus in-depth research, lack of in-depth interpretation of data, etc., to achieve the effect of accurate judgment

Pending Publication Date: 2022-01-14
SICHUAN UNIV
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Problems solved by technology

Processing virus data in this way has a single function and lacks in-depth interpretation of data, which is not conducive to in-depth research on viruses

Method used

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  • Novel coronavirus sample base mutation automatic assessment method

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Embodiment Construction

[0020] Embodiments of the present invention are described in detail below, examples of which are shown in the drawings, wherein the same or similar reference numerals designate the same or similar elements or elements having the same or similar functions throughout. The embodiments described below by referring to the figures are exemplary and are intended to explain the present invention and should not be construed as limiting the present invention.

[0021] In related technologies, when detecting novel coronaviruses, virus sample data is mostly processed through traditional general procedures to obtain data that can be directly interpreted by users. Processing the virus data in this way has a single function and lacks in-depth interpretation of the data, which is not conducive to in-depth research on the virus; according to the automatic evaluation method for the base mutation of the new coronavirus sample according to the embodiment of the present invention, first, obtain the...

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Abstract

The invention discloses a novel coronavirus sample base mutation automatic assessment method, medium and equipment, and the method comprises the steps: obtaining original data of a novel coronavirus sample to be assessed, and carrying out the comparison to generate an intermediate file; analyzing the intermediate file to obtain base sequence information, and comparing the base sequence information of the novel coronavirus sample to be evaluated with a reference sequence to obtain mutation information; classifying the novel coronavirus sample to be assessed according to the mutation information to generate classification information; performing epidemic analysis, function prediction and clinical association on the novel coronavirus sample to be assessed, and generating assessment data according to an epidemic analysis result, a function prediction result, a clinical association result and the classification information; according to the method, the novel coronavirus sample base mutation can be automatically and comprehensively assessed so that the virus sample is accurately judged, and powerful help is provided for virus traceability, virus typing and virus research.

Description

technical field [0001] The present invention relates to the technical field of virus sample data analysis, in particular to a method for automatically evaluating base mutations in novel coronavirus samples, a computer-readable storage medium, and a computer device. Background technique [0002] In related technologies, when detecting novel coronaviruses, virus sample data is mostly processed through traditional general procedures to obtain data that can be directly interpreted by users. Processing virus data in this way has a single function and lacks in-depth interpretation of data, which is not conducive to in-depth research on viruses. Contents of the invention [0003] The present invention aims to solve one of the technical problems in the above-mentioned technologies at least to a certain extent. For this reason, an object of the present invention is to propose an automatic evaluation method for the base mutation of a new coronavirus sample, which can automatically ...

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): G16B20/50G16B40/20
CPCG16B20/50G16B40/20Y02A90/10
Inventor 陈路唐超林静雯
Owner SICHUAN UNIV
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