The invention belongs to the technical field of medical supply chain financial data risk control, and discloses a supply chain financial risk control data cross validation method and system, and computer equipment, and the supply chain financial risk control data cross validation method comprises the steps: obtaining business flow, logistics, information flow and capital flow data of an enterprise in real time through docking with an enterprise ERP system; and when an enterprise has a financing demand, enabling the system to perform cross verification and risk assessment of behavior authenticity of a financing party and a transaction party through the acquired business data. Through cross verification of data of business flow, logistics, information flow and fund flow of an enterprise, risk assessment strength is improved for a fund party, risk control operation is more rigorous, and the problems of tedious financing operation and low financing amount of a financing party are solved; and an online financing platform is provided for a fund party and a financing party, financing operation is simple and rapid, data is safe and accurate, financing risks are reduced, risk control operation is more rigorous, financing requirements of enterprises are met, and reasonable financing amount is obtained.