Subtilases and subtilase variants having altered immunogenicity
A Bacillus subtilis and variant technology, applied in the direction of enzymes, bacteria, hydrolytic enzymes, etc., can solve the problems of epitope loss and importance reduction
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Embodiment 1
[0310] Identification of epitope sequence and epitope pattern in Savinase
[0311] Epitope sequences and patterns were detected as previously described in Example 1 of WO 01 / 83559.
[0312] From highly diverse phage libraries expressing random hexapeptides, nonapeptides, or dodecapeptides as part of membrane proteins (10 12 ) were screened for their ability to bind purified specific rabbit IgG, and purified rat and mouse IgG1 and IgE antibodies. Phage libraries were obtained according to the prior art (see WO 9215679, which is hereby incorporated by reference).
[0313] Antibodies were raised in corresponding animals by subcutaneous, intradermal or intratracheal injection of selected target proteins (N=75) including Savinase and other subtilases in phosphate buffered saline (PBS). Purified from the sera of immunized animals by affinity chromatography using paramagnetic immunobeads (Dynal AS) loaded with porcine anti-rabbit IgG, mouse anti-rat IgG1 or IgE, or rat anti-mouse...
Embodiment 2
[0324] The location of the amino acid positions involved in the potential IgE epitope on the three-dimensional structure of Savinase
[0325] Use appropriate software (such as SwissPort Pdb Viewer, WebLite Viewer) to manually locate the most likely amino acid positions found in potential IgE epitopes (usually these amino acids are found to be likely to involve at least 3 IgE epitopes) On the three-dimensional structure of Savinase (Protein Data Bank accession number 1SVN; Betzel, C., Klupsch, S., Papendorf, G., Hastrup, S., Branner, S., Wilson, K.S.: alkaline protease from Bacillus lentus Crystal structure of Savinase at 1.4 Å resolution (Crystal structure of the alkaline proteinase Savinase from Bacillus lentus at 1.4 Å resolution, J Mol Biol 223 p. 427 (1992)).
[0326] By mapping the amino acids on the three-dimensional structure, it was found that the amino acids that may be involved in the IgE epitope clustered in 3 main regions:
[0327] ●Area 1: P14, A15, R19, G20, T...
Embodiment 3
[0332] Position the amino acid positions selected by protein engineering on the three-dimensional structure of Savinase
[0333] Amino acids for epitope protein engineering are selected based on considerations related to structure and enzyme activity, which means preferential selection of those suggested by 3D analysis or empirically from other protein engineering designs to have a beneficial effect on enzyme activity and / or stability Location.
[0334] Selected amino acids are in the following regions:
[0335] ●Area 1: A15, R19, R275
[0336] ●Area 2: S57
[0337] ●Area 3: E136, N140, Y167, R170, A172, D181, R186, A194, G195, R247, T260, L262
[0338] ●Location N218
[0339] These positions are artificially transformed individually or in combination with each other. Positional unions are selected based on the performance of individual mutations and / or topographical patterns (covering as large a region as possible with as few mutations as possible).
[0340] Based on ...
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