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The Method of Measuring the Absolute Length of Chromosome Telomeres by Single-color Multiplex Quantitative PCR

A chromosome and telomere technology, applied in biochemical equipment and methods, microbial measurement/inspection, etc., can solve the problems of measurement accuracy of a large number of DNA samples, absolute length of chromosomal telomeres, time-consuming and labor-intensive problems, etc., to achieve easy operation, strong consistent effect

Inactive Publication Date: 2011-12-28
杨楠 +1
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  • Summary
  • Abstract
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  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0004] The purpose of the present invention is to provide a method for measuring the absolute length of chromosomal telomeres by a single-color multiplex quantitative PCR method, which solves the problems of time-consuming and labor-consuming measurement of the absolute length of chromosomal telomeres, the need for a large number of DNA samples, and low measurement accuracy in the prior art.

Method used

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  • The Method of Measuring the Absolute Length of Chromosome Telomeres by Single-color Multiplex Quantitative PCR
  • The Method of Measuring the Absolute Length of Chromosome Telomeres by Single-color Multiplex Quantitative PCR
  • The Method of Measuring the Absolute Length of Chromosome Telomeres by Single-color Multiplex Quantitative PCR

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Embodiment

[0074] 1. Design and synthesis of primers

[0075] Primers were designed and synthesized by the phosphoramidite triester method according to the literature.

[0076] 2. Drawing of standard curve

[0077] In a standard sample reaction well, standard sequences of telomeres and single-copy genes were used to replace genomic DNA. In order to make up for the requirement that the diluted standard sequence was less than 20ng, pBR322 plasmid DNA was added to the standard reaction well to make the standard sample well There is 20ng of DNA. Standard sample wells are used to make a standard curve. Instructions are given below:

[0078] Telomere standard curve:

[0079] Synthetic 84-mer (TTAGGG) with known number of molecules 14 For serial dilutions, the number of replicates for each standard is calculated as follows:

[0080] The length of the standard sequence is 84bp (TTAGGG repeats 14 times), and the molecular weight (MW) is 26667.2.

[0081] The mass of a single standard seque...

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Abstract

The invention discloses a method for measuring the absolute length of chromosomal telomeres by single-color multiplex quantitative PCR, which is characterized in that the method comprises the following steps: (1) designing and screening primers for chromosomal telomeres and primers for amplifying internal reference genes Single-copy gene primers require that the difference between the Tm values ​​of the telomere gene primers and the single-copy gene primers be in the range of 10-20°C; (2) Take the telomere sequence of SEQNo: 1 and the single-copy gene of SEQNo: 2 as Standard sequence, draw a standard curve by the external standard method; (3) extract the template DNA, add the template DNA to the PCR reaction system with the primers in step (1) to perform PCR amplification of the target gene in the template DNA; (4) use the standard The curve is the control. The absolute length of telomere was determined by quantitative PCR method. This method eliminates the sampling error, makes the results more accurate, and breaks through the limitation that ordinary quantitative PCR can only measure the relative length of telomeres.

Description

technical field [0001] The invention belongs to the technical field of gene measurement, and in particular relates to a method for measuring the absolute length of chromosomal telomeres by a single-color multiple quantitative PCR method. Background technique [0002] Telomeres (tolemere) are DNA repeats at the ends of chromosomes, which are tandem repeats of (TTAGGG) in human chromosomes. Telomeres are specialized structures at the ends of chromosomes that, in normal human cells, gradually shorten as cells divide. The role of telomeres is to maintain the integrity of chromosomes. Once the cell divides, because the direction of DNA replication must be from 5' to 3', the telomere shortens a little each time the DNA replicates. Once telomeres are depleted, chromosomes are prone to mutations that lead to arteriosclerosis and certain cancers. In recent years, a variety of telomere length measurement methods have been reported, including Southern blot (SB), hybridization protec...

Claims

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Application Information

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IPC IPC(8): C12Q1/68
Inventor 杨楠艾洪新杨林
Owner 杨楠
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