This invention belongs to the field of
genomics and
bioinformatics technology, specifically relating to a method for multidimensional
quality assessment of
telomere-to-
telomere genomes. The method includes the following steps: preprocessing the
genome data to be assessed to obtain preprocessed data; quantitatively assessing multiple core features of the preprocessed data, including accuracy, completeness, continuity, and region specificity; the region specificity includes
telomere identification,
centromere identification, and collinearity with a
reference genome; calculating a comprehensive
score based on the weighted results of the
quantitative assessment of the core features, and using the comprehensive
score to determine the quality of the
genome to be assessed. This assessment method is specifically adapted to the core features of T2T genomes, taking into account continuity, completeness, accuracy, and region specificity, thus solving the problem that traditional methods cannot assess T2T-specific features.