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Multiple PCR primers, kit and application

A kit and multiplex technology, applied in the field of molecular biology, can solve the problems of limited sequencing detection throughput, limited application, and manual analysis of detection results.

Inactive Publication Date: 2017-06-20
GENEMIND BIOSCIENCES CO LTD
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

The Sanger sequencing method is cumbersome to operate, which greatly limits its application in clinical diagnosis. The detection throughput of sequencing is also limited, and manual analysis is required for the detection results, which is time-consuming and labor-intensive.
RFLP is to carry out enzyme digestion reaction by identifying specific sequence sites. The method is simple and low-cost, but its limitation is that it can only detect limited mutations that can produce enzyme cutting sites. lead to false positive or false negative results
The result of reverse dot hybridization technology is interpreted by naked eyes, and the error rate is high, often resulting in repeated testing of a sample
ARMS-PCR needs to design corresponding primers for each mutation, and the amplification conditions of each pair of primers need to be optimized. If multiple mutations need to be detected at the same time, the operation is cumbersome, and false positive or false negative results may also occur

Method used

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  • Multiple PCR primers, kit and application
  • Multiple PCR primers, kit and application
  • Multiple PCR primers, kit and application

Examples

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Embodiment 1

[0058] Embodiment 1 provides a method for preparing a DNA sample to be tested for a β-thalassemia mutation, comprising the following steps:

[0059] 2 milliliters (ml) of fresh peripheral blood samples were collected, and genomic DNA was extracted using QIAamp DNA Mini Kit (Qiagen, Cat. No: 51304) kit, and the concentration and purity of DNA were determined by Nanodrop2000 (Thermo), and then the genomic DNA was preserved.

Embodiment 2

[0061] Example 2 provides a method for constructing a β-thalassemia mutation sequencing library using multiple PCR primers for detecting β-thalassemia mutations, including the following steps:

[0062] 1. Multiplex PCR:

[0063] Using the genomic DNA obtained in Example 1 as the amplification template, using a total of 6 pairs of primers shown in SEQ ID NO: 1 to SEQ ID NO: 12, and then using the Multiplex PCR kit from QIAGEN Company (Catalog No.: 206143), according to the kit instructions Configure the multiplex PCR system. The reaction system is as shown in table 4:

[0064] Table 4:

[0065] Multiplex PCR buffer (Multiplex Buffer, 2×) 25μl Q solvent (Q solution, 5×) 10μl Primer 5μl dna 10μl Total 50μl

[0066] The primers were mixed equimolarly, the total concentration of the primers was 10 micromolar, and the amount of the template could be adjusted, and 200ng was used in this embodiment.

[0067] Then set the PCR instrument p...

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PUM

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Abstract

The invention provides multiple PCR primers for detecting beta-thalassemia mutation based on next-generation sequencing. The multiple PCR primers are two or more primer pairs selected from SEQ ID NO:1 and SEQ ID NO:2 primer pair, SEQ ID NO:3 and SEQ ID NO:4 primer pair, SEQ ID NO:5 and SEQ ID NO:6 primer pair, SEQ ID NO:7 and SEQ ID NO:8 primer pair, SEQ ID NO:9 and SEQ ID NO:10 primer pair, and SEQ ID NO:11 and SEQ ID NO:12 primer pair.

Description

[0001] related application [0002] This application is a divisional case of Chinese patent application 201510740909.5 with an application date of November 4, 2015, and titled "Multiple PCR primers and methods and applications for detecting β-thalassemia mutations based on next-generation sequencing technology". technical field [0003] The invention belongs to the field of molecular biology and relates to primers, in particular to multiple PCR primers, kits and applications. Background technique [0004] β-thalassemia is a monogenic genetic blood disease caused by unbalanced expression of peptide chains due to mutations in the β-globin gene (HBB), mostly caused by point mutations in the β-globin gene. β-thalassemia is one of the most common hereditary diseases in the world. According to statistics, more than 100 million people in the world carry the β-thalassemia gene. β-thalassemia is also one of the most common and most harmful genetic diseases in the southern provinces ...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/68C12N15/11
CPCC12Q1/6858C12Q1/6869C12Q1/6883C12Q2600/156C12Q2600/16C12Q2537/143C12Q2535/122C12Q2531/113C12N15/11C12Q1/68
Inventor 葛良进刘松李改玲邓力蔚林群婷刘丽春
Owner GENEMIND BIOSCIENCES CO LTD
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