Method for specifically improving gene editing efficiency of CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats)-CAS system in epidermal stem cell
An epidermal stem cell and gene editing technology, applied in the field of improving the gene editing efficiency of CRISPR-cas system in epidermal stem cells, can solve the problem of low homologous recombination probability, and achieve the effect of improving gene editing efficiency and efficiency
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Embodiment 1
[0027] Embodiment 1, cloning synergistic protein ESCS-higher and construction vector
[0028]Clone the synergistic protein ESCS-higher gene, and obtain the gene sequence described in SEQ ID NO: 1 through the method of whole gene synthesis. Using this sequence as a template, according to the sequences of the upstream and downstream primers are 5'-atgatatactttattagaat-3', 5 '-tcaagggatttccatttctc-3', primers and whole genome were synthesized by Shanghai Sangon Co., Ltd. The target gene fragment of ESCS-higher gene was amplified by PCR reaction. The amplification reaction system was as follows: 95°C, 40s, 57°C, 1min, 72°C, 1min, 72°C, 10min, cycled 35 times, and the PCR product was produced by Shanghai Shenggong Co., Ltd. Sequencing was performed, and the binding was a complete match to SEQ ID NO:1 by sequencing. Subsequently, the target gene amplified by PCR was connected to the empty vector lentiviral vector pHIV-CS-CDF-CG-PRE, and the recombinant lentiviral vector was identif...
Embodiment 2
[0029] Example 2 Application Analysis of CRISPR / Cas9 in Epidermal Stem Cells and Bone Marrow Mesenchymal Stem Cells
[0030] CRISPR / Cas9 editing vector based on pBGN plasmid containing BSD-fsEGFP fusion gene
[0031] (1) BSD-fsEGFP fusion gene: use conventional PCR to amplify the known BSD gene, 5'-PCR primers with HindIII sites, and 3'-PCR primers to introduce I-SceI and EcoRI sites. Insert the PCR product (BSD) into the HindIII and EcoRI positions between the CMV driver and the EGFP coding region in the EGFP plasmid (the EGFP nucleotide sequence is a sequence known in the art, such as shown in sequence 1 and sequence 2 in CN105647968A) Point, generate the plasmid pBGN containing the BSD-fsEGFP fusion gene, the nucleotide sequence of the BSD-fsEGFP fusion gene is as shown in sequence 3 and sequence 4 in CN105647968A). The fusion gene is driven by CMV driver or PGK driver, but EGFP is inactive due to frameshift, so it is called fsEGFP.
[0032] 5'-PCR primers are
[0033] C...
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