Exon skipping compositions for treating muscular dystrophy

a composition and muscular dystrophy technology, applied in the field of new anti-sense compounds, can solve the problems of affecting the effect of cellular uptake, disrupting the production of functional dystrophin, and compound being much less efficient in immortalized cell cultures expressing higher levels of dystrophin, etc., to achieve the effect of enhancing activity, cellular distribution, or cellular uptak

Inactive Publication Date: 2014-11-06
SAREPTA THERAPEUTICS INC
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Benefits of technology

[0031]In some embodiments, the antisense oligonucleotide is chemically linked to one or more moieties, such as a polyethylene glycol moiety, or conjugates, such as a arginine-rich cell penetrating peptide (e.g., SEQ ID NOs: 24-39), that enhance the activity, cellular distribution, or cellular uptake of the antisense oligonucleotide. In one exemplary embodiment, the arginine-rich polypeptide is covalently coupled at its N-terminal or C-terminal residue to the 3′ or 5′ end of the antisense compound. Also in an exemplary embodiment, the antisense compound is composed of morpholino subunits and phosphorus-containing intersubunit linkages joining a morpholino nitrogen of one subunit to a 5′ exocyclic carbon of an adjacent subunit.

Problems solved by technology

However, such techniques are not useful where the object is to up-regulate production of the native protein or compensate for mutations that induce premature termination of translation, such as nonsense or frame-shifting mutations.
Any exonic mutation that changes the reading frame of the exon, or introduces a stop codon, or is characterized by removal of an entire out of frame exon or exons, or duplications of one or more exons, has the potential to disrupt production of functional dystrophin, resulting in DMD.
In general, dystrophin mutations including point mutations and exon deletions that change the reading frame and thus interrupt proper protein translation result in DMD.
While the first antisense oligonucleotide directed at the intron 23 donor splice site induced consistent exon skipping in primary cultured myoblasts, this compound was found to be much less efficient in immortalized cell cultures expressing higher levels of dystrophin.

Method used

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  • Exon skipping compositions for treating muscular dystrophy
  • Exon skipping compositions for treating muscular dystrophy
  • Exon skipping compositions for treating muscular dystrophy

Examples

Experimental program
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Effect test

example 1

Preparation of Morpholino Oligomers

[0252]The preparation of the compounds of the invention are performed using the following protocol:

[0253]Preparation of trityl piperazine phenyl carbamate 35 (FIGS. 2A and 2B): To a cooled suspension of compound 11 in dichloromethane (6 mL / g 11) was added a solution of potassium carbonate (3.2 eq) in water (4 mL / g potassium carbonate). To this two-phase mixture was slowly added a solution of phenyl chloroformate (1.03 eq) in dichloromethane (2 g / g phenyl chloroformate). The reaction mixture was warmed to 20° C. Upon reaction completion (1-2 hr), the layers were separated. The organic layer was washed with water, and dried over anhydrous potassium carbonate. The product 35 was isolated by crystallization from acetonitrile.

[0254]Preparation of carbamate alcohol 36: Sodium hydride (1.2 eq) was suspended in 1-methyl-2-pyrrolidinone (32 mL / g sodium hydride). To this suspension were added triethylene glycol (10.0 eq) and compound 35 (1.0 eq). The resulti...

example 2

[0279]Using the protocol described in Example 1, the following PMO was synthesized, NG-13-0391 H44A(−8+15), SEQ ID NO: 4 (5′-GAT CTG TCA AAT CGC CTG CAG GT-3′) and used in Examples 8 and 9.

example 3

[0280]Using the protocol described in Example 1, the following PMO was synthesized, NG-13-0392 H44A(−7+15), SEQ ID NO: 5 (5′-GAT CTG TCA AAT CGC CTG CAG G-3′) and used as described in Examples 8 and 9.

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Abstract

Antisense molecules capable of binding to a selected target site in the human dystrophin gene to induce exon 44 skipping are described.

Description

RELATED APPLICATIONS[0001]This patent application claims the benefit of U.S. Provisional Patent Application Ser. No. 61 / 784,547, filed Mar. 14, 2013. The entire contents of the above-referenced provisional patent application are incorporate herein by reference.FIELD OF THE INVENTION[0002]The present invention relates to novel antisense compounds and compositions suitable for facilitating exon skipping in the human dystrophin gene. It also provides methods for inducing exon skipping using the novel antisense compositions adapted for use in the methods of the invention.BACKGROUND OF THE INVENTION[0003]Antisense technologies are being developed using a range of chemistries to affect gene expression at a variety of different levels (transcription, splicing, stability, translation). Much of that research has focused on the use of antisense compounds to correct or compensate for abnormal or disease-associated genes in a wide range of indications. Antisense molecules are able to inhibit ge...

Claims

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Application Information

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Patent Type & Authority Applications(United States)
IPC IPC(8): C12N15/113
CPCC12N15/113C12N2310/33C12N2310/11C12N2320/30A61K31/713A61K47/60A61K47/6455A61P21/00A61P21/04A61P43/00C12N15/111C12N2310/3233C12N2310/351C12N2310/3513C12N2310/3535C12N2320/33A61K31/7088C12N15/11Y02A50/30
Inventor BESTWICK, RICHARD K.FRANK, DIANE ELIZABETHSCHNELL, FRED JOSEPH
Owner SAREPTA THERAPEUTICS INC
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