Unlock instant, AI-driven research and patent intelligence for your innovation.

Biological information computing grid system

A bioinformatics and computing grid technology, applied in the field of bioinformatics computing, can solve problems such as difficulty in completing large-scale bioinformatics calculations, and difficulty in completing large-scale bioinformatics calculations with a single computer, so as to solve computing and storage bottlenecks and save The effect of deploying capital

Active Publication Date: 2009-07-22
BEIJING TOPSEC NETWORK SECURITY TECH +2
View PDF0 Cites 3 Cited by
  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0005] The purpose of the present invention is to provide a biological information computing grid system to solve the problem that a single computer is difficult to complete large-scale biological information calculation
[0006] Because the present invention utilizes the grid technology, the biological information calculation is placed in the grid system and handed over to multiple biological information calculation service terminals to complete, which solves the problem that a single computer is difficult to complete large-scale biological information calculation

Method used

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
View more

Image

Smart Image Click on the blue labels to locate them in the text.
Viewing Examples
Smart Image
  • Biological information computing grid system
  • Biological information computing grid system
  • Biological information computing grid system

Examples

Experimental program
Comparison scheme
Effect test

specific Embodiment approach 1

[0008] Specific implementation mode one: the following combination figure 1 This embodiment will be specifically described. The biological information calculation grid system of this embodiment is composed of a biological information calculation portal server 1 connected to the Internet and other Internet services, a publisher terminal 2 of multiple biological information calculation services, and a user terminal 4 of multiple services; The publisher terminal 2 of the calculation service provides the source code or executable program of the service to the server 1 of the biological information calculation portal; the user terminal 4 of the service searches for the service it needs from The portal server 1 runs the executable program on the publisher terminal 2 of the biological information computing service to obtain the results, or the user terminal 4 of the service writes the program by itself according to the source code provided by the publisher terminal 2 of the biologica...

specific Embodiment approach 2

[0011] Specific Embodiment 2: The difference between this embodiment and Embodiment 1 is that the biological information computing grid system also includes a plurality of service deployer servers 3, and the service deployer servers 3 receive information from the publisher of biological information computing services. The official website of the terminal 2 or the mirror image of the server 1 of the biological information computing portal website downloads the service issued by the publisher terminal 2 of the biological information computing service, and deploys it on its own server for use by all user terminals 4 of the service, and Its own service deployment information is registered on the biological information computing portal server 1 . In this embodiment, the service deployer terminal 3 provides its own computing resources to provide biological information computing services to the service user terminal 4 . In computer science and applications, the term "service" usually...

specific Embodiment approach 3

[0012] Specific embodiment three: the difference between this embodiment and embodiment two is: the biological information computing portal server 1 includes a user management module 1-1, a service publishing module 1-2, a service deployment module 1-3, a service monitoring module Modules 1-4, job scheduling modules 1-5 and job status detection modules 1-6;

[0013] User management module 1-1: to complete the provision of corresponding services to different users and specify the corresponding operation authority;

[0014] In terms of function, users connected to the bioinformatics computing portal server 1 have three roles: service publisher, service deployer and service user. The biological information computing portal server 1 will allow the user to select his own role when the above three types of users register on its website, and save it in the website database. When used, different function menus may be displayed according to the user's role. The biological information...

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

PUM

No PUM Login to View More

Abstract

A biology information calculation gridding system, the invention relates to the biology information calculation field, the invention solves the problem that a single computer is difficult to complete large-scaled biology information calculation. The biology information calculation gridding system comprises a biology information calculation portal website server, a publisher terminal of a plurality of biology information calculation services and a user terminal of a plurality of services; the publisher terminal of biology information calculation services provides source codes or executable programs of services t the biology information calculation portal website server; the user terminal of the services looks for required services from the biology information calculation portal website server, and operates the executable program on the publisher terminal of the biology information calculation services by the biology information calculation portal website server to obtain the results, or the user terminal of the services is operated according to the provided source code writing programs on the publisher terminal of biology information calculation services; the source codes or executable programs provided by the publisher terminal of biology information calculation services are published at the XML file form.

Description

technical field [0001] The invention relates to the field of biological information calculation. Background technique [0002] Since the late 1980s, with the rapid growth of genome sequencing data, bioinformatics (Bioinformatics) has gradually become an independent emerging discipline, and the development of bioinformatics services has also become a specialized field. The database search program Blast, the multi-sequence alignment program ClustalW, the biological phylogenetic analysis software Phylip, and the large-scale sequence analysis software package EMBOSS have become indispensable tools for molecular biology research. Openness, publicity, and common use are the main characteristics of bioinformatics services. These software and services usually adopt various forms of open source copyright notices, most of which use the open source Linux operating system as the main platform, and are mostly freely developed by academic departments such as scientific research instituti...

Claims

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

Application Information

Patent Timeline
no application Login to View More
Patent Type & Authority Applications(China)
IPC IPC(8): H04L12/18G06F17/30
Inventor 张伟哲张宏莉刘文懋何慧吴太康许笑
Owner BEIJING TOPSEC NETWORK SECURITY TECH