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Molecular marker SIsv1223 closely linked with millet herbicide-resistant gene

A herbicide-resistant gene and molecular marker technology, applied in the field of molecular biology, can solve the problems of lack of herbicide resistance, inability to apply broad-spectrum herbicides in grain fields, large quantities, etc., and achieve the effect of high-throughput application

Active Publication Date: 2011-03-16
深圳华大基因农业控股有限公司
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

However, due to the large number and variety of weeds in corn fields, and the lack of herbicide-resistant varieties in production, broad-spectrum herbicides cannot be used to kill weeds in corn fields, which has become a major problem hindering millet production.

Method used

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  • Molecular marker SIsv1223 closely linked with millet herbicide-resistant gene
  • Molecular marker SIsv1223 closely linked with millet herbicide-resistant gene
  • Molecular marker SIsv1223 closely linked with millet herbicide-resistant gene

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0043] Example 1: Construction of F2 Segregated Population of Millet

[0044] The male parent is Zhanggu No. 1: Kangnatujing type (plant height, about 150cm), the flag leaf is long and narrow, the bristles are red, the glume is red, fertile, and the leaf color is greener.

[0045] The female parent is A2 sterile line: non-resistant Natujing type (short plant type, plant height is about 100cm), flag leaves are short and wide, bristles are green, glumes are green, partly sterile, and leaves are yellowish.

[0046] F1 (Zhangzagu No. 3, some anti-Natujing type, plant height is about 130cm) is obtained by crossing the male parent and the female parent.

[0047] The F1 generation selfed produces the F2 generation population, and a total of 480 individual plants were obtained. 480 individuals of the F2 generation were analyzed according to the aforementioned method for determining the resistance type, and a total of 360 strains of the resistance type and part of the resistance type were fou...

Embodiment 2

[0048] Example 2: Extraction of genomic DNA from parents and individuals of F1 and F2 generations

[0049] The CTAB method was used to extract the genomic DNA of the parents, F1 generation, and 480 F2 generation individuals in Example 1. The specific methods are as follows:

[0050] (1) Weigh 1.0g of fresh leaves, cut them into pieces, put them in a mortar, grind them with liquid nitrogen and add 3ml 1.5×CTAB, grind them into a homogenate and transfer them into a 15ml centrifuge tube, then add 1ml 1.5× into the mortar Flush with CTAB and transfer to centrifuge tube. After mixing, in a 65°C water bath for 30 minutes, shaking slowly from time to time.

[0051] The formula of 1.5×CTAB is as follows (1L):

[0052] CTAB 15g

[0053] 1M Tris.Cl (pH 8.0) 75ml

[0054] 0.5M EDTA 30ml

[0055] NaCl 61.4g

[0056] Add deionized water to make the volume to 1L, and add mercaptoethanol with a final concentration of 0.2% (2ml) before use.

[0057] (2) After cooling to room temperature, add an equal vo...

Embodiment 3

[0062] Example 3: Preparation of molecular markers

[0063] Using the genomic DNA of the anti-naptogyne type or part of the anti-naptogyne type extracted in Example 2 from the paternal parent, F1 generation, or F2 generation as a template, molecularly labeled primers (SEQ ID NO: 2 and SEQ ID NO: 3 ) Perform PCR amplification.

[0064] The PCR reaction system is as follows:

[0065] Sterile water 20.2μl

[0066] 10*Buffer (including Mg 2+ ) 2.5μl

[0067] dNTPs(25mM) 0.15μl

[0068] Taq enzyme (5U / μl) 0.15μl

[0069] Forward primer 0.5μl

[0070] Reverse primer 0.5μl

[0071] Template 1.0μl

[0072] Total volume 25μl

[0073] The PCR reaction procedure is as follows:

[0074] Pre-denaturation at 94°C for 5 minutes; denaturation at 94°C for 30 seconds, annealing at 60°C for 30 seconds, 72 extension for 40 seconds, running for 35 cycles; finally, extension at 72°C for 3 minutes. PCR products can be stored at 4°C.

[0075] The amplified products are purified to obtain molecular markers. Sequenc...

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Abstract

The invention belongs to the field of molecular biology and relates to a molecular marker, in particular to a molecular marker closely linked with a millet herbicide-resistant gene. The nucleotide sequence of the molecular marker is shown as SEQID NO:1, or the molecular marker is a deoxyribonucleic acid (DNA) segment which contains the nucleotide sequence shown as SEQ ID NO:1 in a millet genome. The invention also relates to a primer of the molecular marker, the application of the molecular marker to millet herbicide-resistant gene positioning or millet genetic breeding, a millet herbicide-resistant gene positioning method and a millet breeding method. In the invention, a molecular marker SIsv1223 closely linked with the millet herbicide-resistant gene is found, so that a millet genome DNA sequence and the millet herbicide-resistant gene are linked with each other and the establishment of a millet molecular marker-assisted breeding system is further facilitated.

Description

Technical field [0001] The invention belongs to the field of molecular biology, and relates to a molecular marker, in particular, to a molecular marker closely linked to a millet herbicide resistance gene. The invention also relates to a primer of the molecular marker, the use of the molecular marker in millet herbicide resistance gene positioning or millet genetic breeding, a millet herbicide resistance gene positioning method, and a millet breeding method. Background technique [0002] Millet (Setaria italica L. Beauv.) is an important food crop that originated in our country. It is mainly grown in the north of our country and plays an important role in national food production and food security. Millet is a diploid self-pollinated crop with a relatively small genome, about 470Mb. These characteristics make it very suitable for genomic research. [0003] The use of herbicides for weed control has become an important measure to effectively control weeds and improve crop yield and...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12N15/11C12N15/63C12N5/10C12N15/10C12Q1/68
Inventor 张耕耘全志武夏秋菊倪雪梅
Owner 深圳华大基因农业控股有限公司