Specific primes and liquid phase chip for AGT (angiotensinogen) and ACE (angiotensin-converting enzyme) gene polymorphism detection
A technology for gene polymorphism and detection solution, applied in the field of molecular biology, can solve the problems of inability to detect gene mutation, cannot meet practical application, prone to cross-reaction, etc., and achieves avoiding uncertain factors and good signal-to-noise ratio. , the detection effect is consistent
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Embodiment 1
[0026] Example 1 AGT and ACE gene polymorphism detection liquid chip mainly includes:
[0027] 1. ASPE Primers
[0028] Specific primer sequences were designed for wild-type and mutant types of T185C, A75G and C99T common mutation sites of AGT gene, and insertion / deletion (I / D) of common genotypes of ACE gene. ASPE primers consist of "Tag sequence + specific primer sequence". ASPE primer sequences are shown in the table below:
[0029] Table 1 ASPE primer sequences of AGT and ACE genes (Tag sequence + specific primer sequence)
[0030]
[0031] Each ASPE primer includes two parts, the 5' end is a specific tag sequence for the anti-tag sequence on the corresponding microsphere, and the 3' end is a mutant or wild-type specific primer fragment (as shown in the above table 1). All ASPE primers were synthesized by Shanghai Sangon Bioengineering Technology Service Co., Ltd. Each synthesized primer was prepared into a stock solution of 100 pmol / mL with 10 mmol / L Tris Buffer.
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Embodiment 2
[0044] Example 2 Detection of Samples Using AGT and ACE Gene Polymorphism Detection Liquid Chip
[0045] The formula of described various solutions is as follows:
[0046] 50mM MES buffer (pH5.0) formula (250ml):
[0047]
[0048] 2×Tm hybridization buffer
[0049] Reagent
source
Final concentration
Dosage per 250ml
1M Tris-HCl, pH8.0
SigmaT3038
0.2M
50ml
5M NaCl
Sigma S5150
0.4M
20ml
Triton X-100
Sigma T8787
0.16%
0.4ml
[0050] Store at 4°C after filtration.
[0051] ExoSAP-IT kit was purchased from US USB Company.
[0052] Biotin-labeled dCTP was purchased from Shanghai Sangon Bioengineering Technology Service Co., Ltd.
[0053] 1. Sample DNA extraction:
[0054] Refer to the relevant methods of DNA extraction in "Molecular Cloning" to obtain the DNA to be detected.
[0055] 2. PCR amplification of samples to be tested
[0056] Design four pairs of primers a...
Embodiment 3
[0112] Example 3 Detection of AGT and ACE gene polymorphism sites by liquid chip with different ASPE primers
[0113] 1. Design of liquid phase chip preparation (selection of Tag sequence and Anti-Tag sequence)
[0114] Taking the AGT gene T185C site mutation and the ACE gene insertion / deletion mutation detection liquid chip as an example, the specific primer sequence of the 3' end of the ASPE primer was designed for the wild type, mutant type, and insertion / deletion type of T185C, and the ASPE The Tag sequence at the 5' end of the primer is selected from SEQ ID NO.1-SEQ ID NO.8. Correspondingly, the anti-tag sequence coated on the microsphere and complementary to the corresponding tag sequence is selected from SEQ ID NO.17- SEQ ID NO. 24. The specific design is shown in the following table (Table 7). The synthesis of ASPE primers, microspheres coated with anti-tag sequences, amplification primers, detection methods, etc. are as described in Example 1 and Example 2.
[0115...
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