Transcription factor pdd1, its coding gene and application that regulates the development of fruiting bodies of Flammulina velutipes
A Flammulina velutipes, transgenic technology, applied in the field of genetic engineering, can solve the problems of knocking down the adenosine deaminase coding gene, which needs to be developed, and achieve the effect of increasing the total biomass
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Embodiment 1
[0081] Example 1, the acquisition of pdd1 gene and transcription factor PDD1 and its sequence analysis
[0082] 1. Nucleotide sequence of pdd1 gene and amino acid sequence of transcription factor PDD1
[0083] Eight genes encoding both nuclear localization sequences and HMG-box structural proteins were found in the Flammulina velutipes genome. RNA-seq and quantitative PCR were used to analyze the transcription levels of these eight genes at different stages of fruiting body development, and one of the genes was found to be from the original From the base stage to the elongation stage and the mature stage, the expression is gradually up-regulated ( figure 1 ), may play an important function in the development of the fruiting bodies of Flammulina velutipes, and the gene is named pdd1 (primordium development defect1), and its nucleotide sequence is sequence 1. The pdd1 gene encodes the transcription factor PDD1, and the amino acid sequence of the transcription factor PDD1 is SE...
Embodiment 2
[0087] Example 2, construction of pdd1 overexpression mutant strain and pdd1 knockdown expression mutant strain
[0088] 1. Construction of pdd1 overexpression vector
[0089] (1) carry out PCR amplification with primer Pgpd-F and Pgpd-OE-R with the genome DNA of Flammulina velutipes wild-type strain as template, obtain Flammulina velutipes gpd promoter fragment (Pgpd-OE), this gpd promoter comprises gpd gene first Introns and exons, the target sequence size is 920bp. The primer sequences are as follows:
[0090] Pgpd-F:5'-CAGATCCCCCGAATTATTCGAGCTCGGTACAGTCGTG-3';
[0091] Pgpd-OE-R: 5'-AGAAAGAGTGGACCTGTAAAATGGTGAGCAAGAC-3'.
[0092] The PCR reaction program was: 98°C for 30s; 98°C for 10s, 55°C for 90s, 72°C for 60s (25cycles); 72°C for 10min; 4°C.
[0093] (2) PCR amplification was carried out with primers pdd1-F and pdd1-R using the genomic DNA of Flammulina velutipes wild-type strain as a template to obtain the pdd1OE fragment, the target sequence size was 1203bp, and ...
Embodiment 3
[0191] Embodiment 3, the application of pdd1 in regulating the mycelial growth of Flammulina velutipes
[0192] 1. Observation experiment of mycelial growth on plate for pdd1 mutant strain
[0193] (1) The wild type of Flammulina velutipes, pdd1 overexpression mutant strain (pdd1 OE#7 , pdd1 OE#31 and pdd1 OE#38 ) and pdd1 knockdown expression mutant strains (pdd1 RNAi#64 , pdd1 RNAi#148 and pdd1 RNAi#170 ) were respectively made into bacterial blocks (d=5mm) of the same size with a puncher, and were inoculated on drug-free CYM plates, cultured at 25°C for 7 days and photographed.
[0194] (2) During the cultivation process, the growth length of mycelium was measured every 24 hours, and recorded, and the average growth rate of each bacterial strain was calculated.
[0195] The results of the growth and growth rate analysis of different strains are as follows: On the CYM plate, the mycelia growth of the pdd1 overexpression mutant strain was similar to that of the wild typ...
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