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A hybrid approach for automatic clustering and labeling of neuronal fibers in white matter of the brain

A technology of nerve fibers and brain white matter, applied in the field of medical image processing, can solve problems such as the inability to use brain white matter nerve fiber maps for medical research, the inability to recognize and identify nerve fibers, etc.

Active Publication Date: 2011-12-14
南通曙光新能源装备有限公司 +1
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AI Technical Summary

Problems solved by technology

At present, the diffusion tensor nuclear magnetic resonance image is processed, and the nerve fiber tracking of the DTI image is performed using DTIStudio, and the nerve fiber connected by a series of pixel points and the whole white matter nerve fiber map of the brain expressed by a series of nerve fibers can be obtained. However, thousands of nerve fibers without organization and labeling are difficult to satisfy research based on nerve fiber bundles with bioanatomical significance, making it impossible for medical researchers to recognize and identify numerous nerve fibers, and it is also impossible to integrate the brain White matter nerve fiber maps are good for medical research

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  • A hybrid approach for automatic clustering and labeling of neuronal fibers in white matter of the brain
  • A hybrid approach for automatic clustering and labeling of neuronal fibers in white matter of the brain
  • A hybrid approach for automatic clustering and labeling of neuronal fibers in white matter of the brain

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Embodiment Construction

[0072] Now in conjunction with embodiment, accompanying drawing, the present invention will be further described:

[0073] figure 1 It is a flow chart of the framework for clustering, labeling and quantitative analysis of brain white matter nerve fibers according to an embodiment of the present invention.

[0074] 1. The preprocessing of the diffusion tensor image consists of steps 1 to 3:

[0075] Step 1: Use the FDT tool of the FSL toolkit to perform vortex correction on the DTI image, use DTIStudio to calculate the image, and generate a channel map ( Figure II a);

[0076] Step 2: Using the multi-channel DTI segmentation algorithm to obtain the segmentation map expressing the three types of brain white matter, gray matter, and cerebrospinal fluid ( Figure II b), and then use the high-dimensional elastic registration method HAMMER to register the marked standard brain atlas to the segmentation map, and obtain a regional labeling map expressing the white matter or gray m...

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Abstract

The invention relates to a method for automatic clustering and labeling of mixed brain white matter nerve fibers, which is characterized in that: firstly, a standard brain atlas is matched to a single brain space by using a high-dimensional elastic registration method, so that a single brain can be divided into 104 anatomical regions with structural information; then use different nerve fiber bundles to extract and mark 15 kinds of nerve fiber bundles through the characteristics of different brain anatomical regions; for the other 4 kinds, the above-mentioned ones cannot be used because they are strongly entangled with peripheral nerve fiber bundles The nerve fiber bundles extracted by the method are automatically clustered and analyzed by using the method based on the similarity measure combined with Kernel-PCA and Fuzzyc-mean. Finally, a feature-based identification method is used to mark the results of the cluster analysis . Through the above method, the 19 main white matter nerve fiber bundles of the brain can be automatically extracted and labeled.

Description

technical field [0001] The invention relates to a method for automatic clustering and marking of mixed brain white matter nerve fibers, and belongs to the field of medical image processing where the image modality is diffusion tensor nuclear magnetic resonance image (DT-MRI). It is suitable for medical imaging diagnosis based on nerve fiber bundles, analysis of brain structure and function, research on brain development and neurodegenerative diseases, etc. Background technique [0002] DT-MRI diffusion tensor nuclear magnetic resonance images provide a description of the direction and structure of brain nerve fibers, and are currently the only medical imaging technology that can be used to observe brain white matter nerve fibers in vivo. The analysis of brain white matter nerve fibers based on DT-MRI not only provides a tool for direct visual observation of brain nerve fiber bundles, but also enables the quantification of brain white matter nerve fibers by combining differen...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): G06T7/00G01R33/48G06K9/62A61B5/055
CPCG06K9/342G06V10/267
Inventor 郭雷李海蒋希刘天明
Owner 南通曙光新能源装备有限公司
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