Acidic cellulase EGI, gene thereof and application thereof
A technology of acid cellulase and cellulose, applied in the field of genetic engineering
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Embodiment 1
[0151] The isolation of the genomic DNA of embodiment 2 Penicillium sp.TZ1 bacterial strains
[0152] The mycelium cultured in potato juice medium for 3 days was filtered with sterile filter paper and placed in a mortar, 2 mL of extract was added, ground for 5 min, then the ground liquid was placed in a 50 mL centrifuge tube, and genomic DNA was extracted by CTAB method (Sambrook et al., Molecular Cloning, A Laboratory Manual (3rd Edition 2001)).
[0153] Cloning of Example 3 Penicillium sp.TZ1 Cellulase Encoding Gene
Embodiment 2
[0154] The conserved cellulase sequence of the 7th family of glycoside hydrolases was determined through the Pfam database, ClustalW software and published information about the cellulase of the 7th family of glycoside hydrolases. At the same time, combined with the published information on the sequence characteristics of filamentous fungi, the conserved amino acid sequence was determined as GYCDAQC and GCGFNPY, and then deduce the corresponding nucleotide sequence according to the genetic code of the species.
[0155] The degenerate primers EG7F (5'-GGYTACTGYGAYGCNCARTG-3') and EG7R (5'-TATGGGRTTRAANCCCRCANCC-3', Y=C / T, R=A / G, N=A / T / C / G).
Embodiment 3
[0156] Genomic DNA of Penicillium sp.TZ1 was used as a template, and EG7F and EG7R were used as primers for PCR amplification. Then the PCR product was detected by agarose gel electrophoresis, and the obtained fragment of about 250bp was recovered by the recovery kit and ligated into pEASY-T 3 On the carrier, the ligation product was heat-shocked and transformed into E. coli competent cells, and the recombinant transformants were screened, and the transformants containing the target fragment were sent to Beijing Biomed Biotechnology Company for sequencing.
[0157] According to the sequencing results, BLASTx was used to compare the sequences in GenBank of NCBI, and it was preliminarily determined that the obtained fragments were gene fragments of cellulase of the seventh family of glycoside hydrolases.
[0158] According to the obtained partial sequence of the cellulase, three upstream and three downstream specific primers were respectively designed, and the upstream and downs...
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