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miRNA detection probe and miRNA amplification detection method

A detection method and technology for amplifying regions, which are applied in the fields of molecular biology and nucleic acid chemistry, can solve the problems of high detection cost, complex procedures, and large sample volume, and achieve the effects of high detection sensitivity, high amplification efficiency, and easy design.

Inactive Publication Date: 2014-06-04
SHENZHEN INST OF ADVANCED TECH
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Problems solved by technology

Among them, Northern blot is to perform agarose gel electrophoresis on the RNA sample to be tested under denaturing conditions, and then perform membrane transfer and probe hybridization detection. This method has very high specificity, but the process is complicated and requires a large amount of samples , low sensitivity; the microarray method uses special glass slides or silicon chips to lay thousands or tens of thousands of nucleic acid probes on an area of ​​several square centimeters. Detected by fluorescence or current, this method can realize multiple miRNA analysis at the same time, but the detection cost is high; RT-PCR technology is a technology that combines reverse transcription of RNA and polymerase chain amplification reaction of cDNA. Able to amplify nucleic acids with high efficiency; constant temperature amplification technology can achieve high-efficiency amplification of nucleic acids under constant temperature conditions, in which strand displacement amplification uses polymerase and nickase to cyclically extend and nick specific templates, so It can be amplified to produce a large number of target fragments, but the requirements for equipment are very high

Method used

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  • miRNA detection probe and miRNA amplification detection method
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  • miRNA detection probe and miRNA amplification detection method

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Embodiment 1

[0081] The human miRNA let-7a was used as the miRNA to be detected, and the nick endonuclease Nt. A linear template and a hairpin probe were designed for the recognition sequence of BstNBI. The sequence of the linear template is SEQ ID No. 1. The sequence of the hairpin probe is SEQ ID No. 2. A fluorescent quencher group is labeled on the 5' terminal base of the second binding site of the hairpin probe; a fluorescent group is labeled on the 5' terminal base of the second amplification region of the hairpin probe, after labeling of hairpin probes.

[0082] Amplification detection method of miRNA:

[0083] a. Amplification of linear templates

[0084] Incubate solution A at 95°C for 3 minutes, then cool to 55°C, then add solution B, and let the two react at 55°C for 30 minutes to obtain the first mixed solution;

[0085] b. Amplification of hairpin probes

[0086] After mixing the first mixed solution with solution C, put it into the Roche 480 real-time quantitative PCR amp...

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Abstract

The invention discloses a linear template and a hairpin probe and a method for miRNA amplification detection by using the linear template and hairpin probe. The linear template and hairpin probe disclosed by the invention are easy to design; the mirRNA amplification detection method disclosed by the invention has relatively high amplification efficiency and relatively high detection sensitivity.

Description

technical field [0001] The invention relates to the fields of molecular biology and nucleic acid chemistry, in particular to a miRNA detection hairpin probe and a miRNA amplification detection method. Background technique [0002] MicroRNAs (miRNA) are a class of non-coding RNAs with regulatory functions found in eukaryotic cells, usually about 20-25 nucleotides in length. miRNAs are formed from long hairpin-containing precursors that are cleaved by Dicer enzymes, and then combined with RNA-induced silencing complexes (miRISCs) to recognize corresponding messenger RNAs (mRNAs) through complementary base pairing. Depending on the degree of complementarity, miRNAs can degrade or repress the translation of target mRNAs. Studies have shown that miRNAs are widely expressed in animals and plants and participate in various regulatory pathways, including development, virus defense, hematopoietic process, organ formation, cell proliferation and apoptosis, fat metabolism, etc. miRNA...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/68C12N15/11
CPCC12Q1/6844C12Q2531/119C12Q2525/301C12Q2525/207
Inventor 张春阳王国磊
Owner SHENZHEN INST OF ADVANCED TECH
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