Primers, kit and method for detecting Escherichia coli Shiga toxin I by PSR (polymerase spiral reaction)
A technology for Shiga toxin and Escherichia coli, which is applied in biochemical equipment and methods, microbial determination/inspection, DNA/RNA fragments, etc. Simple and fast, shorten the detection cycle, and ensure the effect of reliability
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Embodiment 1
[0043] Example 1 Polymerase helical reaction detection stx1 primer screening
[0044] 1. Design primers
[0045] According to the principle of PSR amplification reaction, three sets of primers as shown in Table 1 were designed for the stx1 target using Primer Premier software.
[0046] Table 1 Primer information
[0047] Primer name
Sequence 5'-3'
Ft-stx1-1
CCTCTGTATTTGCCGAAAAC-GCAAGAGCGATGTTACGG
Bt-stx1-1
CAAAAGCCGTTTATGTCTCC-AGGCAGGACACTACTCAACC
IF-stx1-1
GCTTCAGCTGTCACAGT
IB-stx1-1
TCTTACATTGAACTGGGGA
Ft-stx1-2
CAGTCATTACATAAGAACGCC-TTCGGCAAATACAGAGGG
Bt-stx1-2
CCGCAAGAATACATTACTGAC-AGGCAGGACACTACTCAACC
IF-stx1-2
GATCATCCAGTGTTGTA
IB-stx1-2
TACATTGAACTGGGGA
Ft-stx1-3
CAGTGTTGTACGAAATCCCC-GAGCGATGTTACGGTTTG
Bt-stx1-3
CCCCTAAAGCATGTTGTGAC-AGGCAGGACACTACTCAA
IF-stx1-3
CTGTATTTGCCGAAAAC
IB-stx1-3
ACATTGAACTGGGGAAG
[0048] 2. Est...
Embodiment 2
[0058] Embodiment 2 detects the microbiological method of E.coli O157:H7 based on polymerase helical reaction isothermal amplification technology
[0059] 1. The method for detecting pathogenic microorganisms based on polymerase helical isothermal amplification technology. In this embodiment, E.coliO157:H7 is used as an example, and the reagents used are as follows:
[0060] a. The detection primer Ft aqueous solution, the Bt aqueous solution, the accelerated primer IF aqueous solution, and the IB primer aqueous solution with a concentration of 50 μM each. The primer sequences are as follows (5'-3'):
[0061] Detection primer Ft:
[0062] 5'-CAGTGTTGTACGAAATCCCCGAGCGATGTTACGGTTTG-3' (SEQ ID NO.1);
[0063] Detection primer Bt:
[0064] 5'-CCCCTAAAGCATGTTGTGACAGGCAGGACACTACTCAA-3' (SEQ ID NO. 2);
[0065] Accelerated Primer IF:
[0066] 5'-CTGTATTTGCCGAAAAC-3' (SEQ ID NO.3);
[0067] Accelerated Primer IB:
[0068] 5'-ACATTGAACTGGGGAAG-3' (SEQ ID NO. 4).
[0069] b.2×Rea...
Embodiment 3
[0076] Example 3 Polymerase helical reaction detection type I Shiga toxin specificity test
[0077] Escherichia coli containing type I Shiga toxin (Escherichia coli O157:H7ATCC43895, Escherichia coli E019, Escherichia coli E020, Escherichia coli E043, Escherichia coli E044) and other strains without type I Shiga toxin (Staphylococcus aureus ATCC23235, Staphylococcus aureus ATCC6358, Staphylococcus aureus ATCC12600, Staphylococcus aureus ATCC25923, Staphylococcus aureus ATCC19095, Salmonella ATCC29629, Salmonella ATCC19585, Salmonella ATCC14028, Salmonella ATCC13076, Salmonella ATCC700155, Salmonella ATCC91 Listeria monocytogenes 9 Listeria monocytogenes ATCC19116, Listeria monocytogenes ATCC19114, Listeria monocytogenes ATCC19115, Listeria monocytogenes ATCC15313, vibrio parahaemolyticus ATCC27969, vibrio parahaemolyticus ATCC17802) Genomic DNA according to above-mentioned embodiment 1 Reaction system and conditions Establish the detection method of polymerase helical reaction...
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