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Nucleic acid of KANSL1 code gene mutant and application thereof

A nucleic acid, coding technology, applied in the field of genetic engineering, which can solve the problem of unclear relationship between specific signs and symptoms

Active Publication Date: 2019-03-01
福州福瑞医学检验实验室有限公司 +1
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

But the relationship between KANSL1 gene loss and the specific signs and symptoms of Koolen-de Vries syndrome is unclear

Method used

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  • Nucleic acid of KANSL1 code gene mutant and application thereof
  • Nucleic acid of KANSL1 code gene mutant and application thereof
  • Nucleic acid of KANSL1 code gene mutant and application thereof

Examples

Experimental program
Comparison scheme
Effect test

Embodiment 1

[0052] Example 1 Determination of Koolen-de Vries Syndrome Causative Mutations

[0053] 1. Sample source

[0054] A 15-year-old female patient (proband) with mild mental retardation and epilepsy from Fujian Province, China, her parents had normal intelligence and no history of epilepsy. The inventor selected the patient and her parents for molecular diagnosis of epilepsy. The proband had mild mental retardation, special facial features (high and wide forehead, drooping eyelids, narrow eye clefts, upward slanted outer corners, epicanthus, bulbous nose, protruding ears), friendly personality, good at communication, However, he was emotionally unstable, irritable, and had attention deficit disorder such as trance; he had a history of epilepsy for many years, and EEG epileptiform changes. The body developed normally, and there were no obvious abnormalities in the heart, kidneys, and bones. The patient's family tree is figure 1 As shown, the arrow points to the proband, the soli...

Embodiment 2

[0067] Example 2 Sanger method sequencing verification

[0068] Detect the KANSL1 gene of the family members (including 1 patient and 2 normal family members) in the Koolen-de Vries syndrome patient family described in Example 1: c.3031C>T mutation design for the KANSL1 gene primers, and then obtain the relevant sequence of the mutation site by PCR amplification, product purification and sequencing, and verify whether the c. correlation between.

[0069] The specific method steps are as follows:

[0070] 1. DNA extraction

[0071] Refer to the method for extracting DNA described in Example 1.

[0072] 2. Primer design and PCR reaction

[0073] First, referring to the human genome sequence database hg19 / build36.3, an exon-specific primer targeting the c.3031C>T mutation of the KANSL1 gene was designed. The specific sequence is as follows:

[0074] Upstream primer F: TGTTGGTGTTTGTTTGCCTC (SEQ ID NO: 3)

[0075] Downstream primer R: CAACTGTATTGATCATTTAG (SEQ ID NO: 4)

[0...

Embodiment 3

[0080] Embodiment 3 KANSL1 gene mutant detection kit

[0081] The KANSL1 gene mutant detection kit includes primers capable of detecting the c.3031C>T mutation of the KANSL1 gene. These primers are specific primers for the KANSL1 gene, and their sequences are shown in SEQ ID NO: 3-4 in Example 2. This kit can be used to screen biological samples susceptible to Koolen-de Vries syndrome.

[0082] The specific steps of utilizing the above-mentioned kit to screen biological samples susceptible to Koolen-de Vries syndrome include: extracting the DNA of the subject to be tested, according to the method described in step 2 of Example 1; using the extracted DNA as a template and the above-mentioned KANSL1 Perform PCR reaction with gene-specific primers, and purify the PCR product according to conventional methods in the field; sequence the purified product; compare the sequence obtained by sequencing with the sequence of SEQ ID NO: 1 to determine whether there is c.3031C> T mutation...

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PUM

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Abstract

The invention discloses nucleic acid for encoding KANSL1 gene mutant and application thereof and belongs to the technical field of gene engineering. Compared to a wild type, the KANSL1 code gene mutant has c.3031>T mutation; an amino acid sequence of a polypeptide encoded by the KANSL1 code gene mutant has p.Arg1011* mutation. By detecting whether the new mutant exists, biological samples prone toKoolen-de Vries syndrome can be effectively screened out. A detection method herein has high speed, good accuracy and high efficiency.

Description

technical field [0001] The invention belongs to the technical field of genetic engineering, and in particular relates to a KANSL1 gene mutant and its application. Specifically, the present invention relates to isolated nucleic acids encoding KANSL1 gene mutants and the encoded polypeptides, recombinant cells containing KANSL1 mutant nucleic acids, and methods for screening biological samples susceptible to Koolen-de Vries syndrome. Background technique [0002] Koolen-de Vries syndrome is a disorder characterized by developmental delay and mild to moderate intellectual disability. People with the disorder are often described as outgoing, sociable, and cooperative. They usually present with hypotonia at an early age. About half have recurrent epilepsy. Affected individuals often have distinctive facial features, including a high and broad forehead, drooping eyelids, narrow eye fissures, upsloping outer corners of the eyes, epicanthus, bulbous nose, and prominent ears. Men...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12N15/12C12N15/11C12N5/10C12Q1/6883C12Q1/02C07K14/47
CPCC07K14/47C12N2510/00C12Q1/6883C12Q2600/136C12Q2600/156
Inventor 王开宇陈燕惠宋光运吴晶晶刘小霞
Owner 福州福瑞医学检验实验室有限公司