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Primers and application of duplex PCR for early and rapid detection of Streptococcus agalactiae and Streptococcus iniae

A technology of Streptococcus iniae and Streptococcus nisella, which is applied in the field of microbial detection, can solve the problems of false positive, high cost, missed detection or false detection, etc., and achieves the effect of less sample volume, simple operation and low detection cost.

Active Publication Date: 2022-05-24
JINAN UNIVERSITY
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Both Streptococcus iniae and Streptococcus agalactiae can cause fish septicemia, meningitis and other diseases. It is difficult to accurately judge which kind of Streptococcus is caused by the external symptoms and the colony and shape of the two pathogenic bacteria. This will seriously affect the effective management of the disease
[0003] At present, the conventional diagnostic methods for Streptococcus tilapia are difficult to meet the requirements for rapid diagnosis of infected fish samples. At the same time, some physiological reactions may change with changes in the external environment, which can easily lead to misjudgment.
Ordinary PCR can only detect one gene at a time, which may cause missed or false detections
Fluorescent antibody technology and ELISA are expensive and require skilled technical operations; LAMP has false positives; quantitative PCR requires expensive instruments, professional operations, and high costs.

Method used

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  • Primers and application of duplex PCR for early and rapid detection of Streptococcus agalactiae and Streptococcus iniae
  • Primers and application of duplex PCR for early and rapid detection of Streptococcus agalactiae and Streptococcus iniae
  • Primers and application of duplex PCR for early and rapid detection of Streptococcus agalactiae and Streptococcus iniae

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Experimental program
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Effect test

Embodiment 1

[0045] The establishment of embodiment 1 double PCR rapid detection streptococcus agalactiae and streptococcus iniae method

[0046] (1) Template preparation: Pick Streptococcus agalactiae, Streptococcus iniae, Aeromonas hydrophila, Edwardsiella lentus, Aeromonas viridis, Vibrio vulnificus, mildew Aeromonas, Vibrio alginolyticus and Escherichia coli were inoculated on the brain heart infusion agar medium under aseptic conditions, and cultured at 28°C at a constant temperature. After 24 hours, the cultured bacterial cells were collected respectively, referring to Gram-positive bacteria The DNA extraction method extracts the genomic DNA of various bacteria, and uses a DNA extraction kit (Dalian Bao Bioengineering Co., Ltd.) to extract its genomic DNA, which is used as a reaction template;

[0047] (2) Primer design and synthesis: Primers P-1 and P-2 were designed according to the partial sequence of Streptococcus agalactiae 16S rDNA in GenBank, and the size of the amplified targ...

Embodiment 2

[0056] Embodiment 2 Double PCR detects the DNA sensitivity of Streptococcus agalactiae and Streptococcus iniae, comprising the following steps:

[0057] (1) Take 2-3 mL of the activated S. agalactiae and S. iniae bacterial solutions respectively, extract DNA with a commercial DNA extraction kit, and measure the concentration with a spectrophotometer;

[0058] (2) Dilute the genomic DNA of Streptococcus agalactiae to 9.84×10 -2 , 9.84×10 -3 , 9.84×10 -4 , 9.84×10 -5 , 9.84×10 -6 ng / μL, the genomic DNA of Streptococcus iniae was diluted to 9.30×10 -2 , 9.30×10 -3 , 9.30×10 -4 , 9.30×10 -5 , 9.30×10 -6 ng / μL.

[0059] (3) If figure 2 shown, the DNA sensitivity of S. agalactiae and S. iniae were 9.84 × 10 -5 ng / μL and 9.30×10 -5 ng / μL.

Embodiment 3

[0060] Embodiment 3 Double PCR detects the single bacteria sensitivity of Streptococcus agalactiae and Streptococcus iniae, comprising the following steps:

[0061] (1) Take the activated Streptococcus agalactiae and Streptococcus iniae bacterial solutions respectively, wash twice with 0.9% normal saline, dilute by ten-fold gradient, and plate for counting;

[0062] (2) Dilute the concentration of Streptococcus agalactiae to 2.76×10 6 , 2.76×10 5 , 2.76×10 4 , 2.76×10 3 , 2.76×10 2 , 27.6cfu / mL, and the concentration of Streptococcus iniae was diluted to 2.51×10 6 , 2.51×10 5 , 2.51×10 4 , 2.51×10 3 , 2.51×10 2 , 25.1cfu / mL.

[0063] (3) adopt the system and program of embodiment 1, boil the bacterial liquid prepared above for 10min, and take the supernatant as the template of the sample to be tested;

[0064] (4) If image 3 As shown, the sensitivities of pure strains of S. agalactiae and S. iniae were 2.76 × 10 2 cfu / mL and 2.51×10 2 cfu / mL.

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Abstract

The invention discloses a double PCR primer for early rapid detection of Streptococcus agalactiae and Streptococcus iniae and its application. By using the primers of the invention to detect samples, one-time and simultaneous specific detection of Streptococcus agalactiae and Streptococcus iniae in the sample can be realized. The detection method established by the present invention can detect that the genome content is 9.84×10 ‑5 ng / μL of Streptococcus agalactiae and 9.30×10 ‑ 5 ng / μL Streptococcus iniae, and the concentration of the bacterial solution is 2.76×10 2 cfu / mL of Streptococcus agalactiae and 2.51×10 2 cfu / mL of Streptococcus iniae. This method is fast and accurate in the detection process of tilapia samples, has high specificity, sensitivity, repeatability and stability, and can realize early molecular early warning of tilapia streptococcosis, and has broad application prospects. It provides accurate and effective means for the rapid diagnosis and epidemiological investigation of the disease.

Description

technical field [0001] The invention belongs to the field of microorganism detection, in particular to a primer for early and rapid detection of Streptococcus agalactiae and Streptococcus iniae by double PCR and its application. Background technique [0002] Tilapia is one of the most widely farmed aquatic products in the world. According to incomplete statistics, in 2014, China's tilapia aquaculture production reached 1.6985 million tons, accounting for about 32% of the world's total aquaculture production. In recent years, tilapia streptococcosis has become increasingly serious, which has caused serious economic losses to the tilapia aquaculture industry. Studies have shown that the main pathogens of tilapia streptococcosis are Streptococcus agalactiae and Streptococcus iniae, and the most serious damage in recent years is Streptococcus agalactiae. The pathogenic bacteria can infect a variety of freshwater fish such as sea bream and tilapia, resulting in high mortality. ...

Claims

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Application Information

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Patent Type & Authority Patents(China)
IPC IPC(8): C12Q1/689C12Q1/686C12Q1/14C12N15/11C12R1/46
Inventor 崔淼黎晶晶张辉杰张其中许德麟
Owner JINAN UNIVERSITY
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