Looking for breakthrough ideas for innovation challenges? Try Patsnap Eureka!

Kit and method for constructing DNA library

A DNA library and kit technology, applied in the field of DNA library kits, can solve the problems of complex library construction process, long experiment time, low library output rate, etc., and achieve the effect of improving the efficiency of library construction

Pending Publication Date: 2021-04-27
深圳海普洛斯医学检验实验室
View PDF4 Cites 2 Cited by
  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

However, these library construction kits often have problems such as complicated library construction process, long experiment time, and low library delivery rate.

Method used

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
View more

Image

Smart Image Click on the blue labels to locate them in the text.
Viewing Examples
Smart Image
  • Kit and method for constructing DNA library
  • Kit and method for constructing DNA library
  • Kit and method for constructing DNA library

Examples

Experimental program
Comparison scheme
Effect test

Embodiment

[0109] In this embodiment, a commercial kit was used to extract sample DNA from a clinical sample, and the sample DNA was quantified using a Qubit 3.0 fluorescence quantitator. In addition, a total of three groups were divided into A, B, and C for the experiment.

[0110] In this example, mixed enzyme solution, mixed buffer, T4 DNA ligase, ligation buffer, PCR reaction buffer, amplification primers and purification reagents were prepared respectively. Among them, dNTP is an equal mixture of dATP, dTTP, dCTP and dGTP, the endonuclease is OnePot Fragmentation Enzyme Mix, the PCR reaction buffer is VAHTS HiFiAmplification Mix, the amplification primer is PCR Primer Mix 3 for Illumina, and the purification reagent is HP Pure Beads.

[0111] (1) Prepare the first reaction system of each group according to Table 1 on the ice box, wherein the input amount of sample DNA is 500ng respectively, and the ratio of each component in the first reaction system is as shown in Table 2; then us...

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

PUM

No PUM Login to View More

Abstract

The invention provides a kit and a method for constructing a DNA library, the kit comprises a mixed enzyme solution, a mixed buffer solution, ligase and a ligation buffer solution, the mixed enzyme solution comprises endonuclease, T4 DNA polymerase, Klenow fragments, Taq DNA polymerase and T4 polynucleotide kinase, the mixed buffer solution and the ligation buffer solution comprise DTT and PEG 8000, the mixed enzyme solution and the mixed buffer solution are used for forming a first reaction system, the ligase and the ligation buffer solution are used for forming a second reaction system, in the first reaction system, the working concentration of the endonuclease is 0.01-0.05 U / mu L, the working concentration of the T4DNA polymerase is 0.04-0.1 U / mu L, the working concentration of the Klenow fragment is 0.005-0.02 U / mu L, the working concentration of the Taq DNA polymerase is 0.025-0.075 U / mu L, the working concentration of the T4 polynucleotide kinase is 0.1-0.5 U / mu L, the working concentration of the DTT is 5-10mM, and the working concentration of the PEG 8000 is 1-10%. According to the invention, the kit and the method for constructing the DNA library, which can improve the library construction efficiency, can be provided.

Description

technical field [0001] The present disclosure particularly relates to a kit and method for constructing a DNA library. Background technique [0002] It is well known that next-generation sequencing (NGS) systems can perform a large number of parallel sequencing reactions simultaneously. Although different next-generation sequencing platforms have many differences in technical details, libraries need to be established before sequencing, so the acquisition of libraries is very important. [0003] At present, library construction kits (such as those provided by manufacturers such as illumina, Roche, NEB, etc.) are usually used to construct libraries, and the main process of library construction includes: fragmenting the genome, end repair, adding A reaction, ligation Adapter, magnetic bead capture fragment, PCR amplification and purification steps. However, these library construction kits often have problems such as complicated library construction process, long experiment ti...

Claims

the structure of the environmentally friendly knitted fabric provided by the present invention; figure 2 Flow chart of the yarn wrapping machine for environmentally friendly knitted fabrics and storage devices; image 3 Is the parameter map of the yarn covering machine
Login to View More

Application Information

Patent Timeline
no application Login to View More
IPC IPC(8): C40B50/06C40B40/06
CPCC40B40/06C40B50/06
Inventor 许明炎张晓妮李慧
Owner 深圳海普洛斯医学检验实验室
Who we serve
  • R&D Engineer
  • R&D Manager
  • IP Professional
Why Patsnap Eureka
  • Industry Leading Data Capabilities
  • Powerful AI technology
  • Patent DNA Extraction
Social media
Patsnap Eureka Blog
Learn More
PatSnap group products