LAMP (loop-mediated isothermal amplification) combined detection primer, detection kit and detection method for rhizome traditional Chinese medicinal materials
A technology of combined detection and Chinese medicinal materials, applied in the fields of biochemical equipment and methods, recombinant DNA technology, and microbial determination/inspection, etc. problem, to achieve the effect of convenient operation, expanding the scope of use, and getting rid of dependencies
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Embodiment 1
[0107] Embodiment 1: Screening of primers
[0108] Table 3 Fusarium oxysporum detection primer sequence
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[0111] figure 1 In a, the color judgment primer set1 LAMP detects the specific color rendering diagram of Fusarium oxysporum (Fusarium oxysporum). The figure shows that tubes 1 to 8 are purple and negative. 1~3: Fusarium oxysporum; 4: F.equiseti; 5: F. graminearum; 6: F.moniliforme; 7: F.nivale; 8: H 2 O.
[0112] figure 1 In b, the color judgment primer set2 LAMP detects the specific color rendering diagram of Fusarium oxysporum (Fusarium oxysporum). The figure shows that tubes 1 to 8 are purple and negative. 1~3: Fusarium oxysporum; 4: F.equiseti; 5: F. graminearum; 6: F.moniliforme; 7: F.nivale; 8: H 2 O.
[0113] figure 1 In c, the color determination primer set3 LAMP detects the specific chromogenic diagram of Fusarium oxysporum (Fusarium oxysporum). The figure shows that tubes 1 to 8 are purple and negative. 1~3: Fusarium oxysporum; 4:...
Embodiment 2
[0136] Example 2: A LAMP detection kit suitable for detecting common root rot and white silkworm pathogens (Fusarium oxysporum, Fusarium solani, Mucor circinelloides, Atheliarolfsii) of rhizome Chinese medicinal materials (such as Salvia miltiorrhiza, Aconite and Yuanhu, etc.):
[0137] LAMP primer composition of Fusarium oxysporum: Contains 25 μL detection solution, said detection solution includes: 0.2 μM forward outer primer F3, 0.2 μM reverse outer primer B3, 1.6 μM forward inner primer FIP, 1.6 μM reverse inner primer BIP, 0.8μM Forward Loop Primer LF, 1.4mM dNTPs, 1×LAMP Buffer, 1×Xylenol Orange, 0.8M Betaine, 8mMMgS04, 0.32U / μL Bst DNA polymerase.
[0138] LAMP primer composition of Fusarium solani: Contains 25 μL detection solution, said detection solution includes: 0.2 μM forward outer primer F3, 0.2 μM reverse outer primer B3, 1.6 μM forward inner primer FIP, 1.6 μM reverse inner primer BIP, 0.8μM forward loop primer LF, 0.8μM reverse loop primer LB, 1.4mM dNTPs, 1×L...
Embodiment 3
[0142] Example 3: Specificity test of LAMP reaction of common root rot of rhizome class Chinese herbal medicines and white silkworm pathogens (Fusarium oxysporum, Fusarium solani, Mucor circinelloides, Athelia rolfsii)
[0143] In order to verify the specific primer sequences of Fusarium oxysporum, 9 strains of Fusarium oxysporum and 17 other bacterial strains were used as test materials (Table 1). The LAMP detection results showed that all 9 strains of Fusarium oxysporum could observe yellow color changes. After electrophoresis A ladder-like band of LAMP can be observed. Select 10 strains different from Fusarium oxysporum (Fusarium avenaceum, F.culmorum, F.equiseti, F.equiseti, F.graminearum, F.moniliforme, F.nivale, F.proliferatum, F.solani, F.solani) and The DNA of 7 strains of different genera (Botrytis cinerea, Phytophthora cactorum, P.cambivora, P.iranica, P.pseudosyringae, Pythium carbonicum, Py.Boreale.) was used as a template, and 1 μL of the DNA solution was added to...
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