Method for preparing standard reference for qualitative, quantitative DNA
A deoxyribonucleic acid and reference technology, applied in the field of genetic engineering, can solve the problems of uneven distribution of fragments, many reaction tubes and reagents, and increased manufacturing costs.
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Embodiment 1
[0005] Preparation of 100bp DNA standard reference substance
[0006] This DNA standard reference contains one copy of 100bp, 200bp, 300bp, 400bp, 500bp, 600bp, 700bp, 800bp, 900bp, 1000bp DNA fragments.
[0007] The designed template is as follows: the total length of the template is 1000bp, the base composition G+C content is 40-60%, and the two DNA base sequences of the template are complementary sequences, and the base sequence is:
[0008] 5′-gATgATTTgTgTCCgTACAACTg-3′
[0009] 5′-CAgTTgTACggACACAAATCATC-3′
[0010] Design repeat fragments containing the following base sequences every 100bp from the start,
[0011] 5'-gATgATTTgTgTCCgTACAACTg-3', the number of repetitions is 9 times, the base sequence of the designed PCR primer is the same as the base sequence of the repeating fragment, namely: 5'-gATgATTTgTgTCCgTACAACTg-3',
[0012] The PCR reaction system is as follows: Mg 2+ 1.5mmol / L, KCl 50mmol / L, dNTPs 200μmmol / L, primer 2μmol / L, DNA polymerase 1-5 units, templat...
Embodiment 2
[0016] Preparation of 100bp DNA standard reference substances containing different copy numbers
[0017] This DNA standard reference substance contains two copies of DNA fragments of 200bp, 500bp, and 1000bp. 800bp, 900bp fragments.
[0018] The designed template is as follows: the total length of the template is 2000bp, the base composition G+C content is 40-60%, and the base sequences at both ends are:
[0019] 5′-ATgATTTgTgTCCgTACAACT-3′
[0020] The base sequence at 1000bp is complementary to the base sequence at both ends, and the base sequence is:
[0021] 5'-AgTTgTACggACACAAATCAT-3',
[0022] Same as the template design in Example 1, design a repeat fragment containing the following base sequence every 100 bp from the 5' starting end, 5'-ATgATTTgTgTCCgTACAACT-3', the number of repetitions is 8 times, and then 200 bp, 500 bp, 1000 bp from 1000 bp Design includes:
[0023] Repeat fragment of 5'-ATgATTTgTgTCCgTACAACT-3',
[0024] The designed PCR primers are: 5′-ATgA...
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