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Plant chimeric binding polypeptides for universal molecular recognition

A peptide, the most advanced technology, applied in the field of plant chimeric binding peptides for general molecular recognition, can solve problems such as commercialization obstacles

Inactive Publication Date: 2009-07-29
MONSANTO TECH LLC
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

Finally, the expression of mammalian proteins such as immunoglobulins (e.g. so-called "plant antibodies") in edible plants also raises potential issues of consumer acceptance and is therefore an obstacle to commercialization
This may effectively prevent the use of plant antibodies for many input and output traits in transgenic plants

Method used

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  • Plant chimeric binding polypeptides for universal molecular recognition
  • Plant chimeric binding polypeptides for universal molecular recognition
  • Plant chimeric binding polypeptides for universal molecular recognition

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Experimental program
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Effect test

Embodiment 1

[0153] Embodiment 1, Design and expression of plant scaffold polypeptide sequences

[0154] Several protein domain families were analyzed for their potential to serve as scaffolds. Restricting output to the plant kingdom (Viridiplantae), a PFAM domain search (pfam.wustl.edu; see Bateman et al. (2004)) was performed to restrict domains to those present in green plants. Four protein domain families were selected to build a general plant molecular recognition library: the paradomain of purple acid phosphatase (PAP), plant cysteine ​​protease inhibitors, the plant C2 domain and the ankyrin repeat protein Turn-helix-helix (THH) motif.

[0155] Three purple acid phosphatase scaffolds were designed with the sequences in SEQ ID NO: 34-36. The amino acid sequence of the paradomain from kidney bean PAP was used as query sequence to BLAST against the NCBI database. When limiting the output to proteins found in plants, 62 unique sequences were identified. From the alignment of these...

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Abstract

Libraries of nucleic acids encoding chimeric binding polypeptides based on plant scaffold polypeptide sequences. Also described are methods for generating the libraries.

Description

Background of the invention [0001] The binding specificity and affinity of a protein to a target is mainly determined by the amino acid sequence of the protein in one or more binding domains. Thus, altering the amino acid sequence of the relevant region reconfigures the binding properties of the protein. [0002] In nature, combinatorial changes in protein binding are best illustrated by the vast array of immunoglobulins produced by the immune system. Each immunoglobulin contains a set of short, virtually unique amino acid sequences called hypervariable regions (ie, protein-binding domains), and another set of longer, invariant sequences called constant regions. Despite the vast sequence diversity among the hypervariable regions in the immunoglobulin population, the constant regions form beta sheets that stabilize the three-dimensional structure of the protein. Each set of hypervariable regions confers binding specificity and affinity. Two heavy and two light chain immunogl...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/68C40B40/06
CPCC07K14/415C12N15/1044C12N15/1068C12N9/16
Inventor 珍妮弗·琼斯
Owner MONSANTO TECH LLC