Mutant gene and coding protein of glutamate dehydrogenase of Bacillus natto
A technology of glutamate dehydrogenase and Bacillus natto, which can be used in genetic engineering, plant genetic improvement, oxidoreductase and other directions, and can solve problems that have not yet been reported.
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[0024] Step 1, homologous modeling of Bacillus natto GDH; first search for a protein sequence highly similar to the GDH protein (SEQ ID NO: 2) sequence in the PDB, try to model on the Swiss model, and use the Prosa2003 residue After the energy map analysis, the 1GTM protein from Pyrococcus furiosus and the 1EUZ protein from Mesophilic coccus were finally selected as templates for homology modeling, and the model was modeled, and the obtained protein model was optimized by using SAMM molecular simulation analysis software; the specific process is as follows :
[0025] Using NCBI's BLASTn to compare and analyze the obtained Bacillus natto GDH coding gene sequence (SEQ ID NO: 1), use the ORF Finder module to search for possible open reading frames in the sequence, and find one containing 422 Proteins of amino acid residues were compared and analyzed in BLASTp;
[0026] Six highly similar protein sequences (about 50% similarity) to the protein sequence were obtained in PDB, namel...
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