Mutant gene and coding protein of glutamate dehydrogenase of Bacillus natto
A technology of glutamate dehydrogenase and Bacillus natto, which is used in genetic engineering, plant genetic improvement, oxidoreductase and other directions
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[0028] Step 2, determine the active site of Bacillus natto GDH and the site-directed mutagenesis scheme, use the SAMM molecular simulation analysis software to perform energy minimization analysis on the protein model, and obtain the possible interaction with the substrate glutamic acid (Glu ) have amino acid residues connected by hydrogen bonds, and perform mutation simulation on several amino acid residues with a higher probability of occurrence; the details are as follows:
[0029] ClustalX: Using ClustalX, using 1GTM, 1EUZ, 1PZO, 1HWY, 1V9L, and 2RIR as the comparison objects, multiple sequence alignments of Bacillus subtilis GDH were obtained, and four highly consistent amino acid sequences were obtained, respectively: 80 - Residue 82, Residue 112-120, Residue 195-200, Residue 351-358, the four sequences are very close to the spatial distance of the substrate glutamic acid The region of the enzyme activity center is likely to be contained in it;
[0030] SAMM: Use the S...
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