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Multiple PCR (Polymerase Chain Reaction) primer composition, reagent and multiple PCR-breaking control system for TERT (Telomerase Reverse Transcriptase) gene whole exome next-generation sequencing

A primer composition and next-generation sequencing technology, applied in the direction of recombinant DNA technology, microbial measurement/testing, biochemical equipment and methods, etc., can solve problems such as cumbersome operations, limited detection sites, and inability to detect low-frequency mutations, etc., to achieve The effect of high academic value

Pending Publication Date: 2020-10-13
CHANGSHA KINGMED MEDICAL DIAGNOSTICS INST
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  • Summary
  • Abstract
  • Description
  • Claims
  • Application Information

AI Technical Summary

Problems solved by technology

[0004] Most of the TERT gene mutation detection in the prior art is to detect the C228T and C250T sites of the TERT gene promoter activity, which has the following limitations: 1. Real-time fluorescent quantitative PCR detection and gene chip detection cannot detect unknown sites; 2. The detection site of Sanger sequencing is limited to within 800bp; 3. When multiple sites are involved, the original technology is cumbersome and expensive; 4. It cannot detect low-frequency mutations

Method used

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  • Multiple PCR (Polymerase Chain Reaction) primer composition, reagent and multiple PCR-breaking control system for TERT (Telomerase Reverse Transcriptase) gene whole exome next-generation sequencing
  • Multiple PCR (Polymerase Chain Reaction) primer composition, reagent and multiple PCR-breaking control system for TERT (Telomerase Reverse Transcriptase) gene whole exome next-generation sequencing
  • Multiple PCR (Polymerase Chain Reaction) primer composition, reagent and multiple PCR-breaking control system for TERT (Telomerase Reverse Transcriptase) gene whole exome next-generation sequencing

Examples

Experimental program
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Effect test

Embodiment 1

[0030] The multiplex PCR primer composition used for second-generation sequencing of the whole exon of the TERT gene includes primers shown in SEQ ID NO: 01 to SEQ ID NO: 32.

[0031] Dilute the 32 primers according to the standard of 100p per tube, take a new 1.5ml centrifuge tube, add 2ul of each primer, and rehydrate to a total volume of 200ul. Keep the final concentration of primers at 1 pmol, shake and mix well, and store at -20°C for later use.

[0032] The reagents used for the second-generation sequencing of the whole exons of the TERT gene include the above-mentioned primer composition and the reagents required for the multiplex PCR-interruption sequencing. The specific content is as follows for the multiplex PCR- The interrupted sequencing method is described.

[0033] The multiplex PCR-interrupt sequencing method for the second-generation sequencing of the whole exons of the TERT gene is to use the above-mentioned reagents to perform multiple PCR-interrupt sequenci...

Embodiment 2

[0118] Through the multiplex PCR-interruption control system for the whole exon second-generation sequencing of the TERT gene, the control special equipment implements the multiplex PCR-interruption for the second-generation sequencing of the whole exon of the TERT gene described in Example 1 Methods.

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Abstract

The invention provides a multiple PCR (Polymerase Chain Reaction) primer composition, a reagent and a multiple PCR-breaking control system used for TERT (Telomerase Reverse Transcriptase) gene whole exome next-generation sequencing. The multiple PCR primer composition used for the TERT gene whole exome next-generation sequencing comprises primers disclosed from SEQ ID NO: 01 to SEQ ID NO: 32. Themultiple PCR primer composition, the reagent and the multiple PCR-breaking control system for the TERT gene whole exome next-generation sequencing solves the following existing technical problems that1: since the point mutation of the BRAF gene is mainly detected in the prior art, a detection range is limited; 2: real-time fluorescent quantitation PCR (Polymerase Chain Reaction) detection and a gene chip only can detect known sites; 3: a Sanger sequencing checkout length is smaller than a range of 800 bp; 4: low-frequency mutation can not be detected; and 5: when a plurality of sites are detected, operation is complex, and cost is high.

Description

technical field [0001] The invention relates to the field of gene detection, in particular to a multiple PCR primer composition, reagents and multiple PCR-interruption control system for second-generation sequencing of TERT gene whole exons. Background technique [0002] TERT (telomerase reverse transcriptase, telomerase reverse transcriptase) refers to the catalytic subunit with reverse transcriptase activity in telomerase, which is an important catalytic part of telomerase and affects the regulation mechanism of telomeres, thereby maintaining cell Immortalization and carcinogenesis. The TERT gene is located on chromosome 5, and its transcript NM_001193376.1 has 15 exons, with a total length of 3275 bp. TERT gene mutations are found in malignant tumors such as melanoma, lipoma, hepatoma, and glioma All have a certain detection rate, and the prognosis of positive patients is mostly poor, and they are biomarkers of related tumors. [0003] Regarding the mutation of the TERT...

Claims

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Application Information

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Patent Type & Authority Applications(China)
IPC IPC(8): C12Q1/6886C12Q1/686C12Q1/6869C12N15/11
CPCC12Q1/6886C12Q1/686C12Q1/6869C12Q2600/156C12Q2537/143C12Q2535/122
Inventor 李慧源程柳柳周鹏涛代冰陈鹏
Owner CHANGSHA KINGMED MEDICAL DIAGNOSTICS INST
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