Molecular markers for screening and diagnosing early stage of cervical lesion and application of molecular markers
A technique for molecular markers and cervical lesions, which is applied in analytical materials, biological tests, biochemical equipment and methods, and can solve the problems of low marker value and low specificity
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Embodiment 1
[0021] Example 1: Data screening and integration analysis
[0022] Experimental method: The GEO database is a public repository of functional genomic data developed by NCBI (National Center for Biotechnology Information, USA). Two gene expression profiles were retrieved in the GEO database: GSE7803 (from the platform GPL96[HG-U133A]Affymetrix Human Genome U133A Array, containing 10 samples of normal cervical squamous epithelium, 7 samples of HSIL and 21 samples of CSCC); GSE51993 (from platform Illumina Human v2 MicroRNAexpression beadchip and platform Illumina HumanHT-12V4.0 expression beadchip, each platform contains 9 CIN1 cervical lesion samples, 8 CIN3 cervical lesion samples and 7 normal cervical squamous epithelial samples).
[0023] GEO2R is a network analysis tool used to compare two or more samples in a GEO dataset to identify differential genes in different samples. The GEO2R tool was used to analyze the differential genes between the HSIL, CSCC group and normal ce...
Embodiment 2
[0031] Example 2. Statistics on protein expression of co-expressed differential genes in tissues
[0032] The Human Protein Atlas (HPA) online database provides information on the distribution of 26,000 human proteins in tissues and cells, and detects the expression of each protein in cell lines, normal tissues and tumor tissues by Western blot, immunofluorescence, and immunohistochemical techniques Condition. The present invention makes statistics on the protein expression of 48 common differential genes in normal cervical tissue and cervical cancer tissue, and screens out potential markers of cervical lesions according to the standard of negative expression in normal cervical epithelial tissue and positive expression in cervical cancer tissue .
[0033] In order to verify the expression of 34 up-regulated co-expression differential genes and 14 down-regulation co-expression differential genes in different cervical tissues, the 34 common up-regulation genes and 14 common up-...
Embodiment 3
[0035] Example 3. Tissue sample screening and immunohistochemical verification
[0036] 1. HE staining and immunohistochemistry of tissue
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